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L2_040_124G1_scaffold_511

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_511_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..81
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L2_040_124G1_scaffold_511_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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101..760
DNA (660bp) protein (220aa)
Lipopolysaccharide core heptose(II)-phosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01868}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01868};; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
Phosphoglycerate mutase family protein n=2 Tax=Escherichia coli RepID=U9ZT67_ECOLX
phosphoglycerate mutase
L2_040_124G1_scaffold_511_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(799..1224)
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dCTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dTTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; dUTP diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
Nucleoside triphosphatase NudI n=177 Tax=Escherichia RepID=NUDI_ECOBW
yfaO; putative NUDIX hydrolase
L2_040_124G1_scaffold_511_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1503..2045
DNA (543bp) protein (181aa)
Uncharacterized protein YfaZ n=182 Tax=Escherichia RepID=YFAZ_ECOLI
hypothetical protein
Outer membrane porin {ECO:0000313|EMBL:EOW13296.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_040_124G1_scaffold_511_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2145..3347
DNA (1203bp) protein (401aa)
CinA-like protein n=183 Tax=Escherichia RepID=CINAL_ECOBW
yfaY; competence damage-inducible protein A
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
L2_040_124G1_scaffold_511_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3567..4349
DNA (783bp) protein (261aa)
Uncharacterized HTH-type transcriptional regulator RhmR n=179 Tax=Escherichia RepID=RHMR_ECOLI
yfaX; putative DNA-binding transcriptional regulator
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EKJ83966.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L2_040_124G1_scaffold_511_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4364..5569
DNA (1206bp) protein (402aa)
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L-rhamnonate dehydratase n=7 Tax=Escherichia coli RepID=D6JCE7_ECOLX
racemase
L2_040_124G1_scaffold_511_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5626..6150
DNA (525bp) protein (175aa)
Inner membrane transport protein RhmT n=3 Tax=Escherichia coli RepID=N2I0E4_ECOLX
transporter
Inner membrane transport protein RhmT {ECO:0000313|EMBL:KDY55599.1}; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
L2_040_124G1_scaffold_511_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6163..6915
DNA (753bp) protein (251aa)
Inner membrane transporter RhmT n=2 Tax=Escherichia coli RepID=L2UYE2_ECOLX
Inner membrane transporter RhmT {ECO:0000313|EMBL:ELC07634.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
major facilitator transporter
L2_040_124G1_scaffold_511_10
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6933..7736
DNA (804bp) protein (268aa)
2-keto-3-deoxy-L-rhamnonate aldolase {ECO:0000256|HAMAP-Rule:MF_01290}; Short=KDR aldolase {ECO:0000256|HAMAP-Rule:MF_01290};; EC=4.1.2.53 {ECO:0000256|HAMAP-Rule:MF_01290};; 2-dehydro-3-deoxyrhamnonate aldolase {ECO:0000256|HAMAP-Rule:MF_01290}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
2-keto-3-deoxy-L-rhamnonate aldolase n=177 Tax=Escherichia RepID=RHMA_ECOBW
yfaU; putative aldolase
L2_040_124G1_scaffold_511_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7777..7962)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2UZH1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC07632.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_124G1_scaffold_511_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7975..8874)
DNA (900bp) protein (300aa)
Uncharacterized protein n=98 Tax=Escherichia RepID=D8C010_ECOLX
putative transposase
Uncharacterized protein {ECO:0000313|EMBL:EIF83878.1}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L2_040_124G1_scaffold_511_13
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9067..10257)
DNA (1191bp) protein (397aa)
glpC; sn-glycerol-3-phosphate dehydrogenase subunit C (EC:1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:EFW59663.1}; EC=1.1.5.3 {ECO:0000313|EMBL:EFW59663.1};; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri CDC 796-83.;"
sn-glycerol-3-phosphate dehydrogenase (Anaerobic), K-small subunit n=50 Tax=Enterobacteriaceae RepID=A8A2A8_ECOHS
L2_040_124G1_scaffold_511_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10254..11513)
DNA (1260bp) protein (420aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753}; Short=Anaerobic G-3-P dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753};; Short=Anaerobic G3Pdhase B {ECO:0000256|HAMAP-Rule:MF_00753};; EC=1.1.5.3 {ECO:0000256|HAMAP-Rule:MF_00753};; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
Anaerobic glycerol-3-phosphate dehydrogenase subunit B n=32 Tax=Escherichia coli RepID=GLPB_ECOHS
anaerobic glycerol-3-phosphate dehydrogenase subunit B
L2_040_124G1_scaffold_511_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..13131)
DNA (1629bp) protein (543aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Anaerobic glycerol-3-phosphate dehydrogenase subunit A n=679 Tax=Enterobacteriaceae RepID=GLPA_ECO57
anaerobic glycerol-3-phosphate dehydrogenase subunit A
L2_040_124G1_scaffold_511_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13404..14762
DNA (1359bp) protein (453aa)
Glycerol-3-phosphate transporter n=638 Tax=Enterobacteriaceae RepID=E2QPA5_ECOLX
glpT; sn-glycerol-3-phosphate transporter
Glycerol-3-phosphate transporter {ECO:0000313|EMBL:EGI50069.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
L2_040_124G1_scaffold_511_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14767..15843
DNA (1077bp) protein (359aa)
glpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase GlpQ n=31 Tax=Enterobacteriaceae RepID=B2TW30_SHIB3
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ELC07626.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_124G1_scaffold_511_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15885..16091)
DNA (207bp) protein (69aa)
Putative uncharacterized protein YfaH n=171 Tax=Enterobacteriaceae RepID=YFAH_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEN89850.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L2_040_124G1_scaffold_511_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16306..16956
DNA (651bp) protein (217aa)
Protein InaA n=400 Tax=Enterobacteriaceae RepID=INAA_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV64455.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L2_040_124G1_scaffold_511_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17010..17264)
DNA (255bp) protein (85aa)
Uncharacterized ferredoxin-like protein YfaE n=969 Tax=Enterobacteriaceae RepID=YFAE_ECOL6
ferredoxin
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EFU35139.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L2_040_124G1_scaffold_511_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17264..18394)
DNA (1131bp) protein (377aa)
nrdB; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase 1 subunit beta {ECO:0000313|EMBL:KEN48182.1}; EC=1.17.4.1 {ECO:0000313|EMBL:KEN48182.1};; TaxID=1444091 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C2.;"
Ribonucleoside-diphosphate reductase 1 subunit beta n=554 Tax=Enterobacteriaceae RepID=RIR2_ECO57
L2_040_124G1_scaffold_511_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18628..20913)
DNA (2286bp) protein (762aa)
nrdA; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Ribonucleoside-diphosphate reductase 1 subunit alpha n=199 Tax=Enterobacteriaceae RepID=RIR1_ECOLI
L2_040_124G1_scaffold_511_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21609..25361
DNA (3753bp) protein (1251aa)
Outer membrane autotransporter barrel domain-containing protein n=2 Tax=Escherichia coli RepID=L2UZN0_ECOLX
Adhesin {ECO:0000313|EMBL:ESK04150.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
yfaL; adhesin
L2_040_124G1_scaffold_511_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25489..26211)
DNA (723bp) protein (241aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00472}; 2-octaprenyl-6-hydroxyphenol methylase {ECO:0000255|HAMAP-Rule:MF_00472}; EC=2.1.1.222 {ECO:0000255|HAMAP-Rule:MF_00472};; 3-demethylubiquinone-8 3-O-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00472}; EC=2.1.1.64 {ECO:0000255|HAMAP-Rule:MF_00472};; TaxID=481805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks).;"
Ubiquinone biosynthesis O-methyltransferase n=116 Tax=Escherichia coli RepID=UBIG_ECOLC
Displaying 24 items

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