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L2_040_124G1_scaffold_516

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_516_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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260..1714
DNA (1455bp) protein (485aa)
Putative membrane protein n=1 Tax=Citrobacter rodentium (strain ICC168) RepID=D2TPM9_CITRI
MATE family multidrug exporter {ECO:0000313|EMBL:KEY46602.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L2_040_124G1_scaffold_516_2
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1949..2881)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5N4_CITAM
Putative L,D-transpeptidase ErfK {ECO:0000313|EMBL:GAL48065.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_516_3
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3011..4078)
DNA (1068bp) protein (356aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000313|EMBL:AKE59002.1}; EC=2.4.2.21 {ECO:0000313|EMBL:AKE59002.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1W2_CITAM
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
L2_040_124G1_scaffold_516_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4104..4847)
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobS; cobalamin synthase (EC:2.-.-.-)
Cobalamin synthase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHD2_CITAM
L2_040_124G1_scaffold_516_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4844..5389)
DNA (546bp) protein (182aa)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K6Z8_CITAM
Bifunctional adenosylcobalamin biosynthesis protein CobU {ECO:0000313|EMBL:KDF06361.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. MGH 55.;"
cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
L2_040_124G1_scaffold_516_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..6906)
DNA (1521bp) protein (507aa)
Cobyric acid synthase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5N6_CITAM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalamin biosynthesis protein CobQ
L2_040_124G1_scaffold_516_7
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6903..7718)
DNA (816bp) protein (272aa)
Cobalt import ATP-binding protein CbiO {ECO:0000256|HAMAP-Rule:MF_01710}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; Energy-coupling factor transporter ATP-binding protein CbiO {ECO:0000256|HAMAP-Rule:MF_01710}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Cobalt transporter ATP-binding subunit n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1W7_CITAM
cobalt ABC transporter ATPase
L2_040_124G1_scaffold_516_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..8404)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHD7_CITAM
Cobalamin biosynthesis protein CbiQ {ECO:0000313|EMBL:AGE94752.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalamin biosynthesis protein CbiQ
L2_040_124G1_scaffold_516_9
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8391..8672)
DNA (282bp) protein (94aa)
Cobalt transport protein CbiN n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K703_CITAM
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
cobalt transport protein CbiN
L2_040_124G1_scaffold_516_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8674..9411)
DNA (738bp) protein (246aa)
Cobalt transport protein CbiM n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1KHS2_CITAM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalamin biosynthesis protein CbiM
L2_040_124G1_scaffold_516_11
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9408..10121)
DNA (714bp) protein (238aa)
Cobalt-precorrin-2 C(20)-methyltransferase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5P0_CITAM
Cobalt-precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:GAL48056.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
precorrin-2 C(20)-methyltransferase
L2_040_124G1_scaffold_516_12
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10118..10912)
DNA (795bp) protein (265aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|PIRNR:PIRNR033579}; EC=4.99.1.3 {ECO:0000256|PIRNR:PIRNR033579};; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Sirohydrochlorin cobaltochelatase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1X1_CITAM
sirohydrochlorin cobaltochelatase
L2_040_124G1_scaffold_516_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10924..11685)
DNA (762bp) protein (254aa)
Cobalt-precorrin-6x reductase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHE2_CITAM
Cobalt-precorrin-6X reductase {ECO:0000313|EMBL:AGE94757.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalt-precorrin-6x reductase
L2_040_124G1_scaffold_516_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11706..12431)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K707_CITAM
Cobalt-precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:KEY46589.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
precorrin-3B C(17)-methyltransferase
L2_040_124G1_scaffold_516_15
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13486)
DNA (1056bp) protein (352aa)
Cobalamin biosynthesis protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1KHS6_CITAM
Cobalt-precorrin-5A hydrolase {ECO:0000313|EMBL:GAL48052.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
cobalamin biosynthesis protein CbiG
L2_040_124G1_scaffold_516_16
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13467..14240)
DNA (774bp) protein (258aa)
precorrin-4 C(11)-methyltransferase (EC:2.1.1.133)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5P4_CITAM
Cobalt-precorrin-4 C(11)-methyltransferase {ECO:0000313|EMBL:AGE94760.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_516_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14233..14802)
DNA (570bp) protein (190aa)
Cobalt-precorrin-6Y C(15)-methyltransferase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1X5_CITAM
Cobalt-precorrin-6Y C(15)-methyltransferase {ECO:0000313|EMBL:AGE94761.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
precorrin-6Y C5,15-methyltransferase subunit CbiT
L2_040_124G1_scaffold_516_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14792..15397)
DNA (606bp) protein (202aa)
Cobalt-precorrin-6Y C(5)-methyltransferase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHE7_CITAM
Cobalt-precorrin-6Y C(5)-methyltransferase {ECO:0000313|EMBL:AGE94762.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalt-precorrin-6Y C(5)-methyltransferase
L2_040_124G1_scaffold_516_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15391..16530)
DNA (1140bp) protein (380aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K709_CITAM
cobalamin biosynthesis protein CbiD
L2_040_124G1_scaffold_516_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16527..17159)
DNA (633bp) protein (211aa)
Precorrin-8X methylmutase {ECO:0000313|EMBL:AKE59004.1}; EC=5.4.1.- {ECO:0000313|EMBL:AKE59004.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
Cobalt-precorrin-8X methylmutase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1KHT1_CITAM
precorrin-8X methylmutase CbiC/CobH
L2_040_124G1_scaffold_516_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17172..18131)
DNA (960bp) protein (320aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5P9_CITAM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
cobalamin biosynthesis protein
L2_040_124G1_scaffold_516_22
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18128..19507)
DNA (1380bp) protein (460aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1X8_CITAM
cobyrinic acid a,c-diamide synthase
L2_040_124G1_scaffold_516_23
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20075..20992)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHF1_CITAM
Transcriptional regulator PocR {ECO:0000313|EMBL:GAL48044.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
pocR; pdu/cob regulatory protein pocR
L2_040_124G1_scaffold_516_24
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21201..22010)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K715_CITAM
Glycerol uptake facilitator GlpF {ECO:0000313|EMBL:AGE94768.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
pduF; propanediol diffusion facilitator
L2_040_124G1_scaffold_516_25
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22534..22818
DNA (285bp) protein (95aa)
Propanediol utilisation protein PduA n=3 Tax=Enterobacteriaceae RepID=D2TPQ6_CITRI
pduA; propanediol utilisation protein PduA
Carboxysome structural protein EutM {ECO:0000313|EMBL:KEY46492.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
L2_040_124G1_scaffold_516_26
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22815..23627
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K5Q4_CITAM
Propanediol utilization protein PduB {ECO:0000313|EMBL:GAL48041.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
hypothetical protein
L2_040_124G1_scaffold_516_27
Citrobacter farmeri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23646..25310
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K1Y2_CITAM
Propanediol dehydratase large subunit {ECO:0000313|EMBL:GAL48040.1}; TaxID=1114922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter farmeri GTC 1319.;"
pduC; propanediol dehydratase
L2_040_124G1_scaffold_516_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25321..25989
DNA (669bp) protein (223aa)
pduD; propanediol utilization dehydratase, medium subunit (EC:4.2.1.30)
Uncharacterized protein n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1JHF6_CITAM
Propanediol dehydratase {ECO:0000313|EMBL:AGE94772.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
L2_040_124G1_scaffold_516_29
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26003..26089
DNA (87bp) protein (29aa)
Diol dehydratase small subunit n=1 Tax=Citrobacter amalonaticus Y19 RepID=M1K719_CITAM
Propanediol dehydratase {ECO:0000313|EMBL:AGE94773.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
dehydratase small subunit
Displaying 29 items

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