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L2_040_124G1_scaffold_525

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_525_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..451
DNA (450bp) protein (150aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase 1 {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK 1 {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
Shikimate kinase 1 n=12 Tax=Enterobacteriaceae RepID=C1MD65_9ENTR
L2_040_124G1_scaffold_525_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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509..1597
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=3 Tax=Citrobacter RepID=K8QU30_CITFR
L2_040_124G1_scaffold_525_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1694..2995
DNA (1302bp) protein (434aa)
Protein damX n=3 Tax=Citrobacter RepID=J1G325_9ENTR
Cell division protein DamX {ECO:0000313|EMBL:KJC08991.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cell division protein DamX
L2_040_124G1_scaffold_525_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3113..3949
DNA (837bp) protein (279aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
DNA adenine methylase n=6 Tax=Citrobacter RepID=J0M5M8_9ENTR
DNA adenine methylase
L2_040_124G1_scaffold_525_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3967..4644
DNA (678bp) protein (226aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ribulose-phosphate 3-epimerase n=11 Tax=Citrobacter RepID=C1MD61_9ENTR
ribulose-phosphate 3-epimerase
L2_040_124G1_scaffold_525_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4637..5395
DNA (759bp) protein (253aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_00495};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_00495};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_00495, ECO:0000256|SAAS:SAAS00077902};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Phosphoglycolate phosphatase n=3 Tax=Citrobacter RepID=K8R0C9_CITFR
phosphoglycolate phosphatase
L2_040_124G1_scaffold_525_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5388..6392
DNA (1005bp) protein (335aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Tryptophan--tRNA ligase n=6 Tax=Citrobacter RepID=J0LZ57_9ENTR
tryptophanyl-tRNA synthetase
L2_040_124G1_scaffold_525_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6591..7463
DNA (873bp) protein (291aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=J1G323_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC08996.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_124G1_scaffold_525_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7479..7841
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0M5M4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC05383.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_124G1_scaffold_525_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7925..9088
DNA (1164bp) protein (388aa)
Alanine n-domain protein n=4 Tax=Citrobacter RepID=J0VRW0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC08998.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_124G1_scaffold_525_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9088..10314
DNA (1227bp) protein (409aa)
Mutase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3B8P6_CITFR
Mutase {ECO:0000313|EMBL:ETX67332.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative mutase
L2_040_124G1_scaffold_525_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10311..11189
DNA (879bp) protein (293aa)
Hydrolase n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1HME8_CITFR
Phosphotriesterase-like protein {ECO:0000313|EMBL:ETX67331.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
putative hydrolase
L2_040_124G1_scaffold_525_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11200..11553
DNA (354bp) protein (118aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=C1MD53_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC05379.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L2_040_124G1_scaffold_525_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11565..12869
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DFE2_CITFR
Inner membrane protein {ECO:0000313|EMBL:ETX67329.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_525_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12883..13971
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QVQ5_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX67328.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_040_124G1_scaffold_525_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14037..14207)
DNA (171bp) protein (57aa)
Outer membrane lipoprotein n=3 Tax=Citrobacter RepID=K8R0D7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80099.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
membrane protein
L2_040_124G1_scaffold_525_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14479..15852)
DNA (1374bp) protein (458aa)
cysG; siroheme synthase (EC:1.3.1.76 2.1.1.107 4.99.1.4)
Siroheme synthase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UKZ7_9ENTR
Siroheme synthase {ECO:0000256|HAMAP-Rule:MF_01646}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_040_124G1_scaffold_525_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..16677)
DNA (810bp) protein (270aa)
Formate/nitrite transporter n=5 Tax=Citrobacter RepID=D4BI05_9ENTR
Putative nitrite transporter {ECO:0000313|EMBL:KEL80101.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
nirC; nitrite transporter NirC
L2_040_124G1_scaffold_525_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16864..17190)
DNA (327bp) protein (109aa)
Nitrite reductase {ECO:0000313|EMBL:KJC05374.1}; EC=1.7.1.4 {ECO:0000313|EMBL:KJC05374.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
nirD; nitrite reductase (EC:1.7.1.4)
Nitrite reductase [NAD(P)H] small subunit n=8 Tax=Citrobacter RepID=C1MD46_9ENTR
L2_040_124G1_scaffold_525_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17187..19730)
DNA (2544bp) protein (848aa)
Nitrite reductase large subunit n=5 Tax=Citrobacter RepID=J0VRU9_9ENTR
Nitrite reductase [NAD(P)H] large subunit {ECO:0000313|EMBL:ETX67323.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
nitrite reductase
L2_040_124G1_scaffold_525_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20037..21218)
DNA (1182bp) protein (394aa)
Protein TsgA homolog n=5 Tax=Citrobacter RepID=J1G379_9ENTR
Protein TsgA homolog {ECO:0000256|HAMAP-Rule:MF_01044}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transporter
L2_040_124G1_scaffold_525_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21483..22055
DNA (573bp) protein (191aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
Peptidyl-prolyl cis-trans isomerase n=11 Tax=Enterobacteriaceae RepID=C1MD43_9ENTR
peptidylprolyl isomerase
L2_040_124G1_scaffold_525_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22319..22921
DNA (603bp) protein (201aa)
Cell filamentation protein Fic n=6 Tax=Citrobacter RepID=J0M5L1_9ENTR
Cell filamentation protein Fic {ECO:0000313|EMBL:KJC05370.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cell filamentation protein Fic
L2_040_124G1_scaffold_525_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22953..23516
DNA (564bp) protein (188aa)
anthranilate synthase component II (EC:4.1.3.27)
Para-aminobenzoate synthase component II n=3 Tax=Citrobacter RepID=J0VRU4_9ENTR
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ETX67318.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_040_124G1_scaffold_525_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23602..24819
DNA (1218bp) protein (406aa)
Acetylornithine/succinyldiaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; Short=DapATase {ECO:0000256|HAMAP-Rule:MF_01107};; Short=Succinyldiaminopimelate transferase {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.17 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
argD; acetylornithine aminotransferase (EC:2.6.1.11 2.6.1.17)
Acetylornithine/succinyldiaminopimelate aminotransferase n=3 Tax=Citrobacter RepID=J1G372_9ENTR
L2_040_124G1_scaffold_525_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24911..25684)
DNA (774bp) protein (258aa)
Camp-regulatory protein n=3 Tax=Citrobacter RepID=K8ZRS5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL36186.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
membrane protein
Displaying 26 items

View Taxonomy