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L2_040_124G1_scaffold_535

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_535_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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83..2644
DNA (2562bp) protein (854aa)
Fimbrial outer membrane usher protein PapC n=2 Tax=Escherichia coli RepID=L2UYM5_ECOLX
Fimbrial outer membrane usher protein PapC {ECO:0000313|EMBL:ELC07724.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
outer membrane usher protein
L2_040_124G1_scaffold_535_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2664..3416
DNA (753bp) protein (251aa)
Periplasmic pilus chaperone family protein n=45 Tax=Escherichia coli RepID=A8A2K6_ECOHS
pili assembly chaperone
Periplasmic pilus chaperone family protein {ECO:0000313|EMBL:EDU64983.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
L2_040_124G1_scaffold_535_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3432..3941
DNA (510bp) protein (170aa)
Fimbrial-like adhesin protein n=49 Tax=Escherichia coli RepID=L2UZS0_ECOLX
putative fimbrial protein
Fimbrial family protein {ECO:0000313|EMBL:ENH08790.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
L2_040_124G1_scaffold_535_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3938..4426
DNA (489bp) protein (163aa)
Uncharacterized protein n=48 Tax=Escherichia coli RepID=B2N4U2_ECOLX
hypothetical protein
Fimbrial family protein {ECO:0000313|EMBL:ENH08789.1}; TaxID=1116070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.7.;"
L2_040_124G1_scaffold_535_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4423..4962
DNA (540bp) protein (180aa)
Fimbrial protein n=38 Tax=Escherichia coli RepID=A8A2K3_ECOHS
fimbrial protein
Fimbrial family protein {ECO:0000313|EMBL:ENC91303.1}; TaxID=1116072 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.11.;"
L2_040_124G1_scaffold_535_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4964..5821
DNA (858bp) protein (286aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2UYM1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC07719.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_124G1_scaffold_535_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5893..6444)
DNA (552bp) protein (184aa)
UPF0115 protein YfcN n=794 Tax=Enterobacteriaceae RepID=YFCN_ECO24
hypothetical protein
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L2_040_124G1_scaffold_535_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6610..7542
DNA (933bp) protein (311aa)
yfcB; N5-glutamine methyltransferase (EC:1.3.3.-)
50S ribosomal protein L3 glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02125}; Short=L3 MTase {ECO:0000256|HAMAP-Rule:MF_02125};; EC=2.1.1.298 {ECO:0000256|HAMAP-Rule:MF_02125};; N5-glutamine methyltransferase PrmB {ECO:0000256|HAMAP-Rule:MF_02125}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
50S ribosomal protein L3 glutamine methyltransferase n=305 Tax=Enterobacteriaceae RepID=B6I4X7_ECOSE
L2_040_124G1_scaffold_535_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7577..8662
DNA (1086bp) protein (362aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Chorismate synthase n=338 Tax=Enterobacteriaceae RepID=AROC_ECO27
aroC; chorismate synthase
L2_040_124G1_scaffold_535_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8666..9490
DNA (825bp) protein (275aa)
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Penicillin-insensitive murein endopeptidase n=16 Tax=Escherichia coli RepID=MEPA_ECOHS
mepA; penicillin-insensitive murein endopeptidase
L2_040_124G1_scaffold_535_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9490..10299
DNA (810bp) protein (270aa)
UPF0721 transmembrane protein YfcA n=915 Tax=Bacteria RepID=YFCA_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU35233.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L2_040_124G1_scaffold_535_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10299..10847
DNA (549bp) protein (183aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=L2UXE9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY60065.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
L2_040_124G1_scaffold_535_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10881..11159
DNA (279bp) protein (93aa)
Uncharacterized protein YfcL n=993 Tax=Enterobacteriaceae RepID=YFCL_ECO57
hypothetical protein
YfcL family protein {ECO:0000313|EMBL:EHU54978.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L2_040_124G1_scaffold_535_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11280..13286)
DNA (2007bp) protein (669aa)
mnmC; 5-methylaminomethyl-2-thiouridine methyltransferase (EC:2.1.1.61)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=15 Tax=Escherichia coli RepID=MNMC_ECOHS
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_535_15
Erwinia pyrifoliae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13445..13540
DNA (96bp) protein (32aa)
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase I {ECO:0000313|EMBL:CAY73672.1}; EC=2.3.1.41 {ECO:0000313|EMBL:CAY73672.1};; TaxID=644651 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia pyrifoliae (strain DSM 12163 / CIP 106111 / Ep16/96).;"
3-oxoacyl-[acyl-carrier-protein] synthase I n=12 Tax=Erwinia amylovora RepID=D4HXI3_ERWAC
L2_040_124G1_scaffold_535_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13521..14507
DNA (987bp) protein (329aa)
3-oxoacyl-[acyl-carrier-protein] synthase 1 {ECO:0000313|EMBL:EZJ39667.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EZJ39667.1};; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
3-oxoacyl-[acyl-carrier-protein] synthase I n=4 Tax=Escherichia coli RepID=F8XE54_ECOLX
fabB; 3-oxoacyl-ACP synthase
L2_040_124G1_scaffold_535_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14772..15950
DNA (1179bp) protein (393aa)
UPF0226 protein YfcJ n=223 Tax=Escherichia coli RepID=YFCJ_ECOLI
hypothetical protein
UPF0226 membrane protein ESMG_04021 {ECO:0000256|HAMAP-Rule:MF_01118}; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
L2_040_124G1_scaffold_535_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15947..16942)
DNA (996bp) protein (332aa)
Flagellar regulator flk n=158 Tax=Enterobacteriaceae RepID=FLK_ECOLI
flk; flagella assembly protein
Flagellar regulator flk {ECO:0000256|PIRNR:PIRNR020588}; Fluke {ECO:0000256|PIRNR:PIRNR020588}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_124G1_scaffold_535_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17041..18177
DNA (1137bp) protein (379aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019216}; EC=1.1.1.290 {ECO:0000256|HAMAP-Rule:MF_01825, ECO:0000256|SAAS:SAAS00019244};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Erythronate-4-phosphate dehydrogenase n=117 Tax=Escherichia RepID=PDXB_ECOLC
D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit
L2_040_124G1_scaffold_535_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18243..19256
DNA (1014bp) protein (338aa)
USG-1 protein n=220 Tax=Escherichia RepID=USG_ECOLI
putative semialdehyde dehydrogenase
Semialdehyde dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:KDU32927.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_040_124G1_scaffold_535_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19256..20068
DNA (813bp) protein (271aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
tRNA pseudouridine synthase A n=175 Tax=Escherichia RepID=TRUA_ECOHS
L2_040_124G1_scaffold_535_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20151..20810
DNA (660bp) protein (220aa)
Protein DedA n=476 Tax=Enterobacteriaceae RepID=DEDA_ECO57
hypothetical protein
Protein dedA {ECO:0000313|EMBL:EOQ58384.1}; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
L2_040_124G1_scaffold_535_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20966..21880
DNA (915bp) protein (305aa)
accD; acetyl-CoA carboxylase subunit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_01395};; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1236 Tax=Bacteria RepID=ACCD_ECO24
L2_040_124G1_scaffold_535_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21950..23218
DNA (1269bp) protein (423aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17 6.3.2.12)
Bifunctional protein FolC n=2 Tax=Escherichia coli RepID=L2UZP9_ECOLX
Bifunctional protein FolC {ECO:0000256|PIRNR:PIRNR001563}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_124G1_scaffold_535_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23208..23870
DNA (663bp) protein (221aa)
Protein DedD n=326 Tax=Enterobacteriaceae RepID=DEDD_ECOLI
hypothetical protein
DedD protein {ECO:0000313|EMBL:EOV64070.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L2_040_124G1_scaffold_535_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24129..24617
DNA (489bp) protein (163aa)
Colicin V production protein n=1046 Tax=Enterobacteriaceae RepID=E2QPH4_ECOLX
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:EIG81955.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_040_124G1_scaffold_535_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24654..26171
DNA (1518bp) protein (506aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Amidophosphoribosyltransferase n=431 Tax=Enterobacteriaceae RepID=PUR1_ECOLI
purF; amidophosphoribosyltransferase
L2_040_124G1_scaffold_535_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26266..26835
DNA (570bp) protein (190aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein n=608 Tax=Enterobacteriaceae RepID=UBIX_ECO57
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
L2_040_124G1_scaffold_535_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27101..27883
DNA (783bp) protein (261aa)
Lysine-arginine-ornithine-binding periplasmic protein n=199 Tax=Enterobacteriaceae RepID=ARGT_ECOLI
argT; lysine/arginine/ornithine transporter subunit
Lysine/arginine/ornithine ABC transporter {ECO:0000313|EMBL:ESA89855.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L2_040_124G1_scaffold_535_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28104..28886
DNA (783bp) protein (261aa)
Histidine-binding periplasmic protein n=1141 Tax=Enterobacteriaceae RepID=HISJ_ECO57
cationic amino acid ABC transporter periplasmic binding protein
Histidine ABC transporter, periplasmic histidine-binding protein HisJ {ECO:0000313|EMBL:EGI50134.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Displaying items 1-30 of 42 in total

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