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L2_040_124G1_scaffold_611

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_611_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..618
DNA (618bp) protein (206aa)
H repeat-associated protein ydcC n=1 Tax=Escherichia coli 2726950 RepID=N2KY90_ECOLX
H repeat-associated protein ydcC {ECO:0000313|EMBL:EZJ78719.1}; TaxID=1444191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C3.;"
transposase IS4 family protein
L2_040_124G1_scaffold_611_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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766..1275
DNA (510bp) protein (170aa)
Uncharacterized protein YbgA n=204 Tax=Enterobacteriaceae RepID=YBGA_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFU37591.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L2_040_124G1_scaffold_611_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1272..2690
DNA (1419bp) protein (473aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:KDZ14974.1}; EC=4.1.99.3 {ECO:0000313|EMBL:KDZ14974.1};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Deoxyribodipyrimidine photo-lyase n=95 Tax=cellular organisms RepID=PHR_ECOLI
L2_040_124G1_scaffold_611_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2840..4321)
DNA (1482bp) protein (494aa)
Dipeptide permease D n=124 Tax=Escherichia RepID=DTPD_ECOLI
inner membrane transporter protein YbgH
Dipeptide permease D {ECO:0000256|HAMAP-Rule:MF_01880}; TaxID=1050617 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNF18.;"
L2_040_124G1_scaffold_611_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4592..5335
DNA (744bp) protein (248aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Putative GTP cyclohydrolase 1 type 2 n=1216 Tax=Enterobacteriaceae RepID=GTPC1_ECO57
ybgI; metal-binding protein
L2_040_124G1_scaffold_611_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5358..6014
DNA (657bp) protein (219aa)
Uncharacterized protein YbgJ n=834 Tax=Enterobacteriaceae RepID=YBGJ_ECO57
carboxylase
Putative uncharacterized protein {ECO:0000313|EMBL:EFE63220.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L2_040_124G1_scaffold_611_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6008..6940
DNA (933bp) protein (311aa)
Uncharacterized protein YbgK n=134 Tax=Escherichia RepID=YBGK_ECOLI
ybgK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDZ35954.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
L2_040_124G1_scaffold_611_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6930..7664
DNA (735bp) protein (245aa)
UPF0271 protein YbgL n=105 Tax=Escherichia RepID=YBGL_ECOLC
LamB/YcsF family protein
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_040_124G1_scaffold_611_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7700..8491
DNA (792bp) protein (264aa)
nei; endonuclease VIII/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.-.-)
Endonuclease 8 n=63 Tax=Escherichia RepID=END8_ECOHS
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
L2_040_124G1_scaffold_611_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8488..9534)
DNA (1047bp) protein (349aa)
Protein AbrB n=316 Tax=Enterobacteriaceae RepID=A7ZXX6_ECOHS
membrane protein AbrB duplication
Membrane AbrB duplication domain protein {ECO:0000313|EMBL:KEO03396.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L2_040_124G1_scaffold_611_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9686..10747)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=227 Tax=Enterobacteriaceae RepID=J7QD23_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESD28415.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
L2_040_124G1_scaffold_611_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10744..11475)
DNA (732bp) protein (244aa)
Pili assembly chaperone n=11 Tax=Escherichia coli RepID=B1IY12_ECOLC
pili assembly chaperone
Assembly protein {ECO:0000313|EMBL:EOV81790.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_611_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11490..13940)
DNA (2451bp) protein (817aa)
Outer membrane protein n=2 Tax=Escherichia coli RepID=L2V9K0_ECOLX
Outer membrane protein {ECO:0000313|EMBL:ESK11623.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
fimbrial usher family protein
L2_040_124G1_scaffold_611_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14000..14566)
DNA (567bp) protein (189aa)
Fimbrial protein n=329 Tax=Enterobacteriaceae RepID=B1IY10_ECOLC
fimbrial protein
Fimbrial protein {ECO:0000313|EMBL:EFK45604.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L2_040_124G1_scaffold_611_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14955..16238)
DNA (1284bp) protein (428aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase n=1084 Tax=Enterobacteriaceae RepID=CISY_ECOL6
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L2_040_124G1_scaffold_611_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16444..16551)
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MPL4_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN32150.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L2_040_124G1_scaffold_611_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16932..17336
DNA (405bp) protein (135aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Escherichia coli HVH 79 (4-2512823) RepID=T6JUF6_ECOLX
sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:EFK26077.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L2_040_124G1_scaffold_611_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17330..17677
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small subunit
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:EOV80348.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L2_040_124G1_scaffold_611_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17677..19443
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
succinate dehydrogenase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit n=1198 Tax=Enterobacteriaceae RepID=DHSA_ECO57
L2_040_124G1_scaffold_611_20
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19459..20175
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinate dehydrogenase n=1180 Tax=Enterobacteriaceae RepID=C3TIN2_ECOLX
L2_040_124G1_scaffold_611_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20376..21815
DNA (1440bp) protein (480aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:KDY15306.1}; EC=1.2.4.2 {ECO:0000313|EMBL:KDY15306.1};; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=3 Tax=Escherichia coli RepID=M8Z1W5_ECOLX
L2_040_124G1_scaffold_611_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21833..23059
DNA (1227bp) protein (409aa)
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component {ECO:0000313|EMBL:EHU62395.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EHU62395.1};; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component n=1 Tax=Escherichia coli 2733950 RepID=N3K1E7_ECOLX
sucA; oxoglutarate dehydrogenase, E1 component SucA
L2_040_124G1_scaffold_611_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23074..24291
DNA (1218bp) protein (406aa)
sucB; dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex n=744 Tax=Enterobacteriaceae RepID=ODO2_ECO57
L2_040_124G1_scaffold_611_24
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24657..25823
DNA (1167bp) protein (389aa)
sucC; Succinyl-CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=1331 Tax=Enterobacteriaceae RepID=SUCC_ECO24
L2_040_124G1_scaffold_611_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25823..26692
DNA (870bp) protein (290aa)
sucD; succinate-CoA ligase, alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1324 Tax=Enterobacteriaceae RepID=SUCD_ECO57
L2_040_124G1_scaffold_611_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26796..27518)
DNA (723bp) protein (241aa)
Mannosyl-D-glycerate transport/metabolism system repressor mngR n=2 Tax=Escherichia coli RepID=L2V9A7_ECOLX
Mannosyl-D-glycerate transport/metabolism system repressor mngR {ECO:0000313|EMBL:ESK11635.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
farR; DNA-binding transcriptional repressor MngR
L2_040_124G1_scaffold_611_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27687..29603
DNA (1917bp) protein (639aa)
PTS system, fructose-specific II ABC component n=20 Tax=Escherichia coli RepID=A7ZXZ1_ECOHS
Heat-responsive suppressor hrsA {ECO:0000313|EMBL:EOW26885.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC
L2_040_124G1_scaffold_611_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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29621..32254
DNA (2634bp) protein (878aa)
Alpha-mannosidase mngB {ECO:0000313|EMBL:KEN97441.1}; EC=3.2.1.- {ECO:0000313|EMBL:KEN97441.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Mannosylglycerate hydrolase n=117 Tax=Enterobacteriaceae RepID=MNGB_ECOLI
mngB; Alpha-mannosidase mngB
Displaying 28 items

View Taxonomy