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L2_040_124G1_scaffold_645

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_645_1

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1..285
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_040_124G1_scaffold_645_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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261..1064
DNA (804bp) protein (268aa)
2,5-diketo-D-gluconic acid reductase B {ECO:0000313|EMBL:KDZ35635.1}; EC=1.1.1.274 {ECO:0000313|EMBL:KDZ35635.1};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
2,5-diketo-D-gluconic acid reductase B n=258 Tax=Enterobacteriaceae RepID=DKGB_ECOLI
dkgB; 2,5-diketo-D-gluconate reductase B
L2_040_124G1_scaffold_645_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1061..1975)
DNA (915bp) protein (305aa)
Uncharacterized HTH-type transcriptional regulator YafC n=161 Tax=Enterobacteriaceae RepID=YAFC_ECOLI
yafC; putative DNA-binding transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:KDU29949.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L2_040_124G1_scaffold_645_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2237..3016
DNA (780bp) protein (260aa)
UPF0294 protein YafD n=2 Tax=Escherichia coli RepID=E9Z253_ECOLX
yafD; hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L2_040_124G1_scaffold_645_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3020..3643
DNA (624bp) protein (208aa)
Uncharacterized protein YafE n=117 Tax=Enterobacteriaceae RepID=YAFE_ECOLI
methyltransferase YafE
Methyltransferase domain protein {ECO:0000313|EMBL:KEO02660.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L2_040_124G1_scaffold_645_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3691..4911)
DNA (1221bp) protein (407aa)
membrane-bound lytic murein transglycosylase D n=1 Tax=Escherichia coli RepID=UPI0002BB6A2B
mltD; membrane-bound lytic murein transglycosylase D
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EFK48645.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L2_040_124G1_scaffold_645_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5121..5876)
DNA (756bp) protein (252aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Hydroxyacylglutathione hydrolase n=346 Tax=Escherichia RepID=GLO2_ECO57
gloB; hydroxyacylglutathione hydrolase GloB
L2_040_124G1_scaffold_645_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5910..6632
DNA (723bp) protein (241aa)
Uncharacterized protein YafS n=129 Tax=Escherichia RepID=YAFS_ECOLI
hypothetical protein
Methyltransferase domain protein {ECO:0000313|EMBL:EFU97506.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L2_040_124G1_scaffold_645_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6629..7096)
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
Ribonuclease H n=12 Tax=Escherichia coli RepID=D8A3N0_ECOLX
ribonuclease HI RnhA
L2_040_124G1_scaffold_645_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7152..7892
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III n=3 Tax=Escherichia coli RepID=E9Z247_ECOLX
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EQY28885.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L2_040_124G1_scaffold_645_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8429..9214
DNA (786bp) protein (262aa)
Uncharacterized lipoprotein YafT n=84 Tax=Escherichia RepID=YAFT_ECOLI
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:KEL23733.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
L2_040_124G1_scaffold_645_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9351..9830)
DNA (480bp) protein (160aa)
Uncharacterized protein YkfM n=56 Tax=Escherichia RepID=YKFM_ECOLI
hypothetical protein
Lethality reduction protein, putative inner membrane protein {ECO:0000313|EMBL:AKF54174.1}; Uncharacterized protein {ECO:0000313|EMBL:AJB50355.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L2_040_124G1_scaffold_645_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10355..10753)
DNA (399bp) protein (133aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=L2V954_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC12046.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
yafU; inner membrane protein
L2_040_124G1_scaffold_645_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10797..11279)
DNA (483bp) protein (161aa)
Uncharacterized protein n=471 Tax=Enterobacteriaceae RepID=J7Q656_ECOLX
hypothetical protein
Type VI secretion system effector, Hcp1 family protein {ECO:0000313|EMBL:EHW26012.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_040_124G1_scaffold_645_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11303..12655)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=169 Tax=Escherichia coli RepID=B7LHC5_ECO55
hypothetical protein
ImpA family protein {ECO:0000313|EMBL:EFU97500.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L2_040_124G1_scaffold_645_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12666..14267)
DNA (1602bp) protein (534aa)
Type VI secretion system lysozyme-like protein n=2 Tax=Escherichia coli RepID=L2VB19_ECOLX
Type VI secretion system lysozyme-like protein {ECO:0000313|EMBL:ESK01191.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
IcmF
L2_040_124G1_scaffold_645_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14274..15749)
DNA (1476bp) protein (492aa)
Type VI secretion protein, EvpB/VC_A0108 family n=42 Tax=Escherichia coli RepID=D8APR8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO16639.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
L2_040_124G1_scaffold_645_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15800..16024)
DNA (225bp) protein (75aa)
Uncharacterized protein n=593 Tax=Enterobacteriaceae RepID=A7ZHX0_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV39498.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L2_040_124G1_scaffold_645_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16059..16559)
DNA (501bp) protein (167aa)
Type VI secretion protein n=3 Tax=Escherichia coli RepID=E9XQ92_ECOLX
Type VI secretion protein {ECO:0000313|EMBL:ELC12052.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
hypothetical protein
L2_040_124G1_scaffold_645_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17254..17772
DNA (519bp) protein (173aa)
Hcp n=651 Tax=Escherichia RepID=O52671_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD88028.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_040_124G1_scaffold_645_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17982..18731
DNA (750bp) protein (250aa)
Rhs element Vgr family protein n=29 Tax=Escherichia coli RepID=E2WRR6_ECOLX
Rhs element Vgr family protein {ECO:0000313|EMBL:ENB16392.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
VgrG protein
L2_040_124G1_scaffold_645_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18703..20139
DNA (1437bp) protein (479aa)
Protein rhsD n=2 Tax=Escherichia coli RepID=L2VC80_ECOLX
Protein rhsD {ECO:0000313|EMBL:ELC12055.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
rhs core protein with extension
L2_040_124G1_scaffold_645_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20117..20335
DNA (219bp) protein (73aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=D7XIJ5_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI43842.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
hypothetical protein
L2_040_124G1_scaffold_645_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20332..20508
DNA (177bp) protein (59aa)
Uncharacterized protein n=63 Tax=Escherichia coli RepID=B2NB98_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY13847.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
Displaying 24 items

View Taxonomy