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L2_040_124G1_scaffold_735

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_735_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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683..1756
DNA (1074bp) protein (358aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILV3_9CLOT
L2_040_124G1_scaffold_735_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1756..4974
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS40_9CLOT
L2_040_124G1_scaffold_735_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5741..6277
DNA (537bp) protein (179aa)
CarD family transcriptional regulator n=4 Tax=Clostridium RepID=N9Z7T6_9CLOT
CarD family transcriptional regulator {ECO:0000313|EMBL:ENZ16549.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator
L2_040_124G1_scaffold_735_4
unknown

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6249..6431
DNA (183bp) protein (61aa)

This feature has no annotations

L2_040_124G1_scaffold_735_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6363..7268)
DNA (906bp) protein (302aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRQ0_9CLOT
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_735_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7505..7921
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39508.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
abortive infection protein
L2_040_124G1_scaffold_735_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7991..9010
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39509.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
family 2 glycosyl transferase
L2_040_124G1_scaffold_735_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9714)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39510.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphoesterase PA-phosphatase-like protein
L2_040_124G1_scaffold_735_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9895..10755
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IS37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39511.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RpiR family transcriptional regulator
L2_040_124G1_scaffold_735_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11034..11939
DNA (906bp) protein (302aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Tagatose-6-phosphate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRQ4_9CLOT
1-phosphofructokinase
L2_040_124G1_scaffold_735_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12147..14126
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IBS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39513.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system fructose subfamily transporter subunit IIC
L2_040_124G1_scaffold_735_12
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14219..15580)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AL77_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA51750.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
norM; Na+-driven multidrug efflux pump
L2_040_124G1_scaffold_735_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15564..16190)
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EJ17_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG28482.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
TetR family transcriptional regulator
L2_040_124G1_scaffold_735_14
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16787..17059
DNA (273bp) protein (91aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatases n=1 Tax=Clostridium sp. CAG:43 RepID=R7B2V6_9CLOT
Acylphosphatases {ECO:0000313|EMBL:CDD58396.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
L2_040_124G1_scaffold_735_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17347..18273
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39806.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
diacylglycerol kinase catalytic subunit
L2_040_124G1_scaffold_735_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18366..18914
DNA (549bp) protein (183aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ICJ4_9CLOT
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
L2_040_124G1_scaffold_735_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18984..20393
DNA (1410bp) protein (470aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHM0_9CLOT
L2_040_124G1_scaffold_735_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20378..20863
DNA (486bp) protein (162aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Mini-ribonuclease 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISH6_9CLOT
ribonuclease III
L2_040_124G1_scaffold_735_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20864..21607
DNA (744bp) protein (248aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=1 Tax=Clostridium sp. CAG:7 RepID=R5ICI5_9CLOT
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CCY39795.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_124G1_scaffold_735_20
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21655..22617
DNA (963bp) protein (321aa)
Transglutaminase-like protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENC8_9FIRM
Transglutaminase-like protein {ECO:0000313|EMBL:EEQ59640.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transglutaminase domain-containing protein
L2_040_124G1_scaffold_735_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22691..23764
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39759.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
type II secretion system F domain-containing protein
L2_040_124G1_scaffold_735_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23791..24141
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39757.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_735_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24138..24638
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ICF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39755.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_735_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24619..25158
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39747.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_124G1_scaffold_735_25
unknown

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comp(25133..25282)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 25 items

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