ggKbase home page

L2_040_124G1_scaffold_960

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_960_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..962)
DNA (714bp) protein (238aa)
PAP2 family protein n=52 Tax=Escherichia coli RepID=B2N6Q3_ECOLX
phosphoesterase PA-phosphatase related
PAP2 family protein {ECO:0000313|EMBL:EFK14172.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L2_040_124G1_scaffold_960_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1001..1987)
DNA (987bp) protein (329aa)
Cobalamin synthesis cobW C-terminal domain protein n=37 Tax=Escherichia coli RepID=M8LLC5_ECOLX
Cobalamin synthesis cobW C-terminal domain protein {ECO:0000313|EMBL:EMU69348.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
cobalamin synthesis protein P47K
L2_040_124G1_scaffold_960_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2105..3571)
DNA (1467bp) protein (489aa)
Mannitol dehydrogenase family protein n=45 Tax=Escherichia coli RepID=A8A235_ECOHS
mannitol dehydrogenase domain-containing protein
D-mannonate oxidoreductase {ECO:0000313|EMBL:EHW68414.1}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC10B.;"
L2_040_124G1_scaffold_960_4
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3794..4366)
DNA (573bp) protein (191aa)
Elongation factor P (EF-P) n=13 Tax=Enterobacteriaceae RepID=D7YNX5_ECOLX
elongation factor P-like protein YeiP
Elongation factor P-like protein {ECO:0000256|HAMAP-Rule:MF_00646, ECO:0000256|SAAS:SAAS00055120}; TaxID=1401327 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae WRSd3.;"
L2_040_124G1_scaffold_960_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4521..4775
DNA (255bp) protein (85aa)
Uncharacterized protein n=25 Tax=Enterobacteriaceae RepID=B2N6Q7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV61451.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L2_040_124G1_scaffold_960_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4772..5953)
DNA (1182bp) protein (394aa)
Sugar efflux transporter B n=306 Tax=Enterobacteriaceae RepID=A7ZNZ4_ECO24
putative transport protein
Sugar efflux transporter B {ECO:0000313|EMBL:EOW13216.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
L2_040_124G1_scaffold_960_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6321..7451
DNA (1131bp) protein (377aa)
PTS system fructose-specific phosphotransferase enzyme IIA component n=45 Tax=Escherichia coli RepID=A8A231_ECOHS
bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein
Multiphosphoryl transfer protein {ECO:0000313|EMBL:ESD99873.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L2_040_124G1_scaffold_960_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7451..8389
DNA (939bp) protein (313aa)
fruK; 1-phosphofructokinase (EC:2.7.1.56)
1-phosphofructokinase n=1392 Tax=Enterobacteriaceae RepID=K1PF_ECO57
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L2_040_124G1_scaffold_960_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8406..10097
DNA (1692bp) protein (564aa)
PTS system, fructose-specific IIB component / PTS system, fructose-specific IIC component {ECO:0000313|EMBL:CDK84692.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDK84692.1};; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
PTS system, fructose-specific transport protein n=106 Tax=Enterobacteriaceae RepID=J7QFP1_ECOLX
fruA; fruA, subunit of fructose PTS transporter
L2_040_124G1_scaffold_960_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10521..11462
DNA (942bp) protein (314aa)
Kinase, pfkB family protein n=43 Tax=Escherichia coli RepID=A8A228_ECOHS
hypothetical protein
PfkB domain protein {ECO:0000313|EMBL:ACT28554.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L2_040_124G1_scaffold_960_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11450..12388
DNA (939bp) protein (313aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
Pseudouridine-5'-phosphate glycosidase n=27 Tax=Escherichia coli RepID=A8A227_ECOHS
indigoidine synthase A family protein
L2_040_124G1_scaffold_960_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12482..13516
DNA (1035bp) protein (345aa)
Nucleoside transporter n=1 Tax=Escherichia coli AD30 RepID=K5CPN2_ECOLX
putative nucleoside transporter
Nucleoside permease {ECO:0000256|RuleBase:RU362018}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L2_040_124G1_scaffold_960_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13510..13590)
DNA (81bp) protein (27aa)
Putative transposase (Fragment) n=1 Tax=Escherichia coli 2872000 RepID=M8TDC4_ECOLX
IS1 ORF2
Putative transposase {ECO:0000313|EMBL:KDA59809.1}; Flags: Fragment;; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Displaying 13 items

View Taxonomy