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L2_040_124G1_scaffold_989

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_989_1
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..105)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KP36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48113.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
int1; putative transposon integrase
L2_040_124G1_scaffold_989_2
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(258..464)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KX70_9FIRM
Excisionase from transposon Tn916.
Uncharacterized protein {ECO:0000313|EMBL:EOS48112.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L2_040_124G1_scaffold_989_3
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(608..859)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5M5K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86808.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L2_040_124G1_scaffold_989_4
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(840..1283)
DNA (444bp) protein (148aa)
DNA-directed RNA polymerase specialized sigma subunit (EC:2.7.7.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MAZ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY86809.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L2_040_124G1_scaffold_989_5

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comp(1810..2916)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=root RepID=R9KRJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKC79053.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
L2_040_124G1_scaffold_989_6
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2909..3784)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KRZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49108.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
multidrug ABC transporter ATPase
L2_040_124G1_scaffold_989_7

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comp(3769..4539)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1ULU8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC79045.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_040_124G1_scaffold_989_8

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comp(4536..5069)
DNA (534bp) protein (178aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=human gut metagenome RepID=K1UGB5_9ZZZZ
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:EKC79044.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ECF subfamily RNA polymerase sigma-24 factor
L2_040_124G1_scaffold_989_9
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5592..5978)
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2Q1P1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66367.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_040_124G1_scaffold_989_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6241..6594)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM53112.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_040_124G1_scaffold_989_11
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6636..7436)
DNA (801bp) protein (267aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VPJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX75427.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L2_040_124G1_scaffold_989_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7475..8224)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QKG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK66323.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L2_040_124G1_scaffold_989_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8586..8999
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSH2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92315.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L2_040_124G1_scaffold_989_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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9692..10633
DNA (942bp) protein (314aa)
Plasmid recombination enzyme n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUA8_9FIRM
Plasmid recombination enzyme.
Plasmid recombination enzyme {ECO:0000313|EMBL:CBL41400.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L2_040_124G1_scaffold_989_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10704..10895
DNA (192bp) protein (64aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. M62/1 RepID=D4C885_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENY86451.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_124G1_scaffold_989_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10990..12501
DNA (1512bp) protein (504aa)
Resolvase, N-terminal domain protein n=2 Tax=Firmicutes RepID=D4CAH2_9CLOT
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFE13247.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_040_124G1_scaffold_989_17
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12755..13120
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=U4AF77_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCY86812.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L2_040_124G1_scaffold_989_18
unknown

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13120..13245
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 18 items

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