ggKbase home page

L2_040_124G1_scaffold_593

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_593_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

116..712
DNA (597bp) protein (199aa)
Putative phage tail component domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G216_9SPHI
Putative phage tail component domain protein {ECO:0000313|EMBL:EEI90706.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
KilA-N, DNA-binding domain-containing protein
L2_040_124G1_scaffold_593_2
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(805..1014)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2NYI3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF53818.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
L2_040_124G1_scaffold_593_3
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1014..1616)
DNA (603bp) protein (201aa)
Heavy metal-associated domain protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G218_9SPHI
Heavy metal-associated domain protein {ECO:0000313|EMBL:EEI90708.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
putative copper-transporting ATPase
L2_040_124G1_scaffold_593_4
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1613..1987)
DNA (375bp) protein (125aa)
ArsR family transcriptional regulator n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S1C7_9FLAO
Arsenical resistance operon repressor
Arsenical resistance operon repressor {ECO:0000313|EMBL:AIL45311.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
L2_040_124G1_scaffold_593_5
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2137..4137)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S636_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:GAE64139.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
L2_040_124G1_scaffold_593_6
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4239..5525)
DNA (1287bp) protein (429aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZX4_9FLAO
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFK33904.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
relaxase/mobilization nuclease family protein
L2_040_124G1_scaffold_593_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5533..5964)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VZX5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33905.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
uncharacterized protein
L2_040_124G1_scaffold_593_8
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6729..7496
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0M8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64142.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
chromosome partitioning ATPase
L2_040_124G1_scaffold_593_9
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7501..7950
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Sphingobacteriaceae RepID=F0S628_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52131.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_10
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7962..8597
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE64144.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
L2_040_124G1_scaffold_593_11
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8624..10444)
DNA (1821bp) protein (607aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
UvrD/REP helicase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S626_PEDSD
UvrD/REP helicase
L2_040_124G1_scaffold_593_12
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10448..12589)
DNA (2142bp) protein (714aa)
SMC domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S625_PEDSD
SMC domain-containing protein
SMC domain protein {ECO:0000313|EMBL:ADY52128.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_13
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12630..13442)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S624_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52127.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_14
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13443..15218)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S623_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52126.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_15
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15208..15498)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S622_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52125.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_16
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15495..16391)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S621_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52124.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_17
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16399..16614)
DNA (216bp) protein (72aa)
Helix-turn-helix domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S620_PEDSD
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY52123.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_18
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16872..17177
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F0S619_PEDSD
hypothetical protein
Conjugative transposon protein TraE {ECO:0000313|EMBL:EFK56940.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
L2_040_124G1_scaffold_593_19
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17189..17518
DNA (330bp) protein (110aa)
Conjugative transposon protein TraF n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N8_9FLAO
Conjugative transposon protein TraF {ECO:0000313|EMBL:EFK34037.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
L2_040_124G1_scaffold_593_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17515..19107
DNA (1593bp) protein (531aa)
Type IV secretory pathway VirB4 components-like protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S617_PEDSD
type IV secretory pathway VirB4 components-like protein
Type IV secretory pathway VirB4 components-like protein {ECO:0000313|EMBL:ADY52120.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
L2_040_124G1_scaffold_593_21
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19126..19626
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IU44_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES65675.2}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein
L2_040_124G1_scaffold_593_22
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19634..21442
DNA (1809bp) protein (603aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6IU45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41952.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
maturase
L2_040_124G1_scaffold_593_23
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21432..22427
DNA (996bp) protein (332aa)
Conjugation system ATPase, TraG family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W0N9_9FLAO
Conjugation system ATPase, TraG family {ECO:0000313|EMBL:EFK34038.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
type IV secretory pathway VirB4 components-like protein
Displaying 23 items

View Taxonomy