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L2_040_124G1_scaffold_1316

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_1316_1
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1167
DNA (1167bp) protein (389aa)
Radical SAM domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAE90814.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
Fe-S oxidoreductase
L2_040_124G1_scaffold_1316_2
unknown

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1188..1367
DNA (180bp) protein (60aa)

This feature has no annotations

L2_040_124G1_scaffold_1316_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1376..2587
DNA (1212bp) protein (404aa)
5-methylthioribose kinase (EC:2.7.1.100)
5-methylthioribose kinase {ECO:0000313|EMBL:CAL82817.1}; EC=2.7.1.100 {ECO:0000313|EMBL:CAL82817.1};; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A).;"
Methylthioribose kinase n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZUS8_CLOB0
L2_040_124G1_scaffold_1316_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2681..3571
DNA (891bp) protein (297aa)
ABC transporter related protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GFR5_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:KIE46781.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
multidrug ABC transporter ATPase
L2_040_124G1_scaffold_1316_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3574..4377
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035DD145
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC-2 type transporter
L2_040_124G1_scaffold_1316_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4760..4900)
DNA (141bp) protein (47aa)
Putative IS transposase n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1L308_CLOBM
Putative transposase family protein {ECO:0000313|EMBL:KIE48176.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative IS transposase
L2_040_124G1_scaffold_1316_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4903..5073)
DNA (171bp) protein (57aa)
Putative IS transposase n=2 Tax=Clostridium botulinum RepID=B1INY8_CLOBK
putative IS transposase
Putative IS transposase {ECO:0000313|EMBL:ACA57423.1}; TaxID=498214 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Loch Maree / Type A3).;"
L2_040_124G1_scaffold_1316_8
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5090..5491)
DNA (402bp) protein (134aa)
Transposase n=41 Tax=Firmicutes RepID=C9BQU7_ENTFC
Transposase-like protein {ECO:0000313|EMBL:EJX58781.1}; TaxID=1134834 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R446.;"
hypothetical protein
L2_040_124G1_scaffold_1316_9
unknown

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5741..5890
DNA (150bp) protein (50aa)

This feature has no annotations

L2_040_124G1_scaffold_1316_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5983..6666
DNA (684bp) protein (228aa)
Cytochrome C biogenesis protein n=2 Tax=Clostridium botulinum A RepID=A5HYF5_CLOBH
Cytochrome C biogenesis transmembrane region family protein {ECO:0000313|EMBL:KIE46670.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cytochrome c-type biogenesis protein CcdA
L2_040_124G1_scaffold_1316_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6727..7266
DNA (540bp) protein (180aa)
Putative thiol-disulfide oxidoreductase ResA n=2 Tax=Clostridium botulinum F RepID=A7GA23_CLOBL
Redoxin family protein {ECO:0000313|EMBL:KIE46699.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative thiol-disulfide oxidoreductase ResA
L2_040_124G1_scaffold_1316_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7288..7965
DNA (678bp) protein (226aa)
DNA-binding response regulator n=2 Tax=Clostridium botulinum RepID=B1Q8Y7_CLOBO
Putative DNA-binding response regulator {ECO:0000313|EMBL:BAQ12358.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
DNA-binding response regulator
L2_040_124G1_scaffold_1316_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7937..9355
DNA (1419bp) protein (473aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sensor histidine kinase (EC:2.7.3.-)
Sensor histidine kinase n=2 Tax=Clostridium botulinum F RepID=A7GA25_CLOBL
Displaying 13 items

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