ggKbase home page

L2_040_124G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_218_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

323..634
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium intestinale URNW RepID=U2Q2I7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE44585.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Protein of unknown function DUF3795
L2_040_124G1_scaffold_218_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1227..1793
DNA (567bp) protein (189aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028993EF
NUDIX domain protein {ECO:0000313|EMBL:KIE44609.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
NUDIX hydrolase
L2_040_124G1_scaffold_218_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1928..2782
DNA (855bp) protein (285aa)
Transcriptional regulator of multidrug-efflux transporter genes, merR familiy n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AV71_CLOA9
MerR regulatory family protein {ECO:0000313|EMBL:KIE45048.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
multidrug-efflux transporter transcriptional regulator
L2_040_124G1_scaffold_218_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2849..4210
DNA (1362bp) protein (454aa)
multidrug transporter MatE n=1 Tax=Clostridium sp. JC122 RepID=UPI000289BE77
MATE efflux family protein {ECO:0000313|EMBL:KIE44704.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Na+ driven multidrug efflux pump, MATE efflux family
L2_040_124G1_scaffold_218_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5211..6449
DNA (1239bp) protein (413aa)
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AUD6_CLOA9
Nitrogenase component 1 type Oxidoreductase family protein {ECO:0000313|EMBL:KIE45281.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nifE2; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
L2_040_124G1_scaffold_218_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6682..7083
DNA (402bp) protein (134aa)
Glyoxalase family protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0R3_9CLOT
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:KIE45264.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
L2_040_124G1_scaffold_218_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7379..8104)
DNA (726bp) protein (242aa)
HAD family hydrolase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289C840
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KIE45209.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
HAD superfamily hydrolase
L2_040_124G1_scaffold_218_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8291..8665
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PNC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE45177.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_218_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8904..9500
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZIY9_9CLOT
Peptidase M1 family protein {ECO:0000313|EMBL:KIE44279.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Peptidase M1 membrane alanine aminopeptidase
L2_040_124G1_scaffold_218_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9707..10258
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NBM7_9CLOT
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KIE45044.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase sigma factor, sigma-70 family
L2_040_124G1_scaffold_218_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10258..10656
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PNL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE44673.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_218_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10649..10852
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PH13_9CLOT
Putative membrane protein {ECO:0000313|EMBL:KIE44627.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_218_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11179..12342
DNA (1164bp) protein (388aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VQC3_CLOBO
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:KIE44795.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
iron-containing alcohol dehydrogenase
L2_040_124G1_scaffold_218_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12509..14689
DNA (2181bp) protein (727aa)
diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028940E3
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KIE44965.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
diguanylate cyclase domain protein
L2_040_124G1_scaffold_218_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15165..15767
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBM6_9FIRM
Putative signal transduction histidine kinase, LytS {ECO:0000313|EMBL:KIE44920.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_218_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15894..16670
DNA (777bp) protein (259aa)
Cobalt transport protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CTC0_9FIRM
Cobalt transport family protein {ECO:0000313|EMBL:KIE44583.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cobalt transporter
L2_040_124G1_scaffold_218_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16658..17515
DNA (858bp) protein (286aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAB8_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:KIE44668.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter related protein
L2_040_124G1_scaffold_218_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17496..18308
DNA (813bp) protein (271aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2ELF5_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:KIE44637.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter related protein
L2_040_124G1_scaffold_218_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18601..20166)
DNA (1566bp) protein (522aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E25556
Voltage gated chloride channel family protein {ECO:0000313|EMBL:KIE44345.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
voltage gated chloride channel family protein
L2_040_124G1_scaffold_218_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20297..21040)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E31211
Putative DNA metabolism protein {ECO:0000313|EMBL:KIE44572.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_218_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21446..22756)
DNA (1311bp) protein (437aa)
biotin synthase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287D2C8
4Fe-4S single cluster domain protein {ECO:0000313|EMBL:KIE44386.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
radical SAM domain-containing protein
L2_040_124G1_scaffold_218_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22940..24571
DNA (1632bp) protein (544aa)
SNF2 helicase associated domain protein n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5S2B3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE44876.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
SNF2 helicase associated domain protein
L2_040_124G1_scaffold_218_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24549..26042
DNA (1494bp) protein (498aa)
Protein, SNF2 family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EI75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KIE44876.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
SNF2 helicase associated domain protein
L2_040_124G1_scaffold_218_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26345..27178
DNA (834bp) protein (278aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum RepID=C6DXU8_CLOBO
Putative membrane protein {ECO:0000313|EMBL:KIE45088.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_218_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27414..29498
DNA (2085bp) protein (695aa)
AraC family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000288831B
Glycosyl hydrolases 39 family protein {ECO:0000313|EMBL:KIE44362.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulatory protein
L2_040_124G1_scaffold_218_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29736..31121
DNA (1386bp) protein (462aa)
multidrug transporter MatE n=1 Tax=Clostridium sp. JC122 RepID=UPI00028822F9
MATE efflux family protein {ECO:0000313|EMBL:KIE45146.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
L2_040_124G1_scaffold_218_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31537..32409
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0G7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE45153.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_218_28
unknown

Not on your lists

32730..32864
DNA (135bp) protein (45aa)

This feature has no annotations

L2_040_124G1_scaffold_218_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33077..33601
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3L2D7_CLOB6
Acetyltransferase domain protein {ECO:0000313|EMBL:KIE45292.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
GNAT family acetyltransferase
L2_040_124G1_scaffold_218_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34376..34951
DNA (576bp) protein (192aa)
Group-specific protein n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FLF0_9AQUI
Uncharacterized protein {ECO:0000313|EMBL:KIE44883.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
Displaying items 1-30 of 52 in total

View Taxonomy