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L2_040_124G1_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_292_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..87)
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8FP59_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:ETD65656.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
L2_040_124G1_scaffold_292_2
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(354..794)
DNA (441bp) protein (147aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R6R5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR14447.1}; Flags: Fragment;; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
non-ribosomal peptide synthase/amino acid adenylation enzyme
L2_040_124G1_scaffold_292_3
unknown

Not on your lists

comp(918..1100)
DNA (183bp) protein (61aa)

This feature has no annotations

L2_040_124G1_scaffold_292_4
unknown

Not on your lists

comp(1268..1393)
DNA (126bp) protein (42aa)

This feature has no annotations

L2_040_124G1_scaffold_292_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1416..2201)
DNA (786bp) protein (262aa)
ABC-2 type transporter n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D042_HALOH
Uncharacterized protein {ECO:0000313|EMBL:KGG79786.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
ABC-2 type transporter
L2_040_124G1_scaffold_292_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2207..3136)
DNA (930bp) protein (310aa)
ABC-type multidrug transport system ATPase component n=1 Tax=delta proteobacterium BABL1 RepID=V6DFV5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KGG79785.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
drrA_1; ABC-type multidrug transport system ATPase component
L2_040_124G1_scaffold_292_7
unknown

Not on your lists

comp(3404..3496)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_040_124G1_scaffold_292_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4159..4623)
DNA (465bp) protein (155aa)
Rrf2 family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003639AF0
Rrf2 family protein {ECO:0000313|EMBL:KIE46437.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
BadM/Rrf2 family transcriptional regulator
L2_040_124G1_scaffold_292_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4806..5465
DNA (660bp) protein (220aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVT8_CLOC7
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:KIE46503.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
polar amino acid ABC transporter inner membrane subunit
L2_040_124G1_scaffold_292_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5446..6123
DNA (678bp) protein (226aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVT7_CLOC7
Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:KIE46291.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
polar amino acid ABC transporter inner membrane subunit
L2_040_124G1_scaffold_292_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6136..6894
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Leptotrichia sp. oral taxon 225 str. F0581 RepID=U2V8P0_9FUSO
ABC transporter family protein {ECO:0000313|EMBL:KIE46502.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter
L2_040_124G1_scaffold_292_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6894..7739
DNA (846bp) protein (282aa)
Extracellular solute-binding protein family 3 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SVT5_CLOC7
Putative amino-acid transporter periplasmic solute-binding protein {ECO:0000313|EMBL:KIE46319.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
family 3 extracellular solute-binding protein
L2_040_124G1_scaffold_292_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7826..8353)
DNA (528bp) protein (176aa)
Putative lipoprotein {ECO:0000313|EMBL:KIE46407.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_292_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8604..9164)
DNA (561bp) protein (187aa)
Nitroreductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D5K2_METSW
Nitroreductase family protein {ECO:0000313|EMBL:KIE46525.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
nitroreductase
L2_040_124G1_scaffold_292_15
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..9909)
DNA (519bp) protein (173aa)
Flagellar motor switch protein FliG n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2K1E0_TRELE
Uncharacterized protein {ECO:0000313|EMBL:KEZ88450.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
flagellar motor switch protein FliG
L2_040_124G1_scaffold_292_16
unknown

Not on your lists

comp(9990..10142)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_040_124G1_scaffold_292_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10126..10578)
DNA (453bp) protein (151aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
S-ribosylhomocysteine lyase n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KWT6_CLOBM
luxS; S-ribosylhomocysteinase
L2_040_124G1_scaffold_292_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10942..11874)
DNA (933bp) protein (311aa)
Anaerobic sulfite reductase subunit C n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q895Q8_CLOTE
Nitrite/Sulfite reductase ferredoxin-like half domain protein {ECO:0000313|EMBL:KIE46077.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
anaerobic sulfite reductase subunit C
L2_040_124G1_scaffold_292_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12023..12925)
DNA (903bp) protein (301aa)
LysR substrate binding domain protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2E5J2_9FIRM
Bacterial regulatory helix-turn-helix, lysR family protein {ECO:0000313|EMBL:KIE46447.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulatory protein
L2_040_124G1_scaffold_292_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13075..14058)
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5N8Q1_CLOK5
Putative membrane protein {ECO:0000313|EMBL:KIE46244.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_292_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14061..14390)
DNA (330bp) protein (110aa)
PadR family transcriptional regulator, regulatory protein PadR n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KGR7_9FIRM
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:KIE46458.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
PadR family transcriptional regulator
L2_040_124G1_scaffold_292_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14691..15242)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SRA0_CLOC7
Putative membrane protein {ECO:0000313|EMBL:KIE46207.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_292_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15389..15850)
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium sp. CAG:167 RepID=R5WCG8_9CLOT
hypothetical protein
L2_040_124G1_scaffold_292_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15902..17101)
DNA (1200bp) protein (400aa)
Riboflavin biosynthesis protein RibBA n=2 Tax=Clostridiales RepID=U2NX46_9FIRM
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RibA; GTP cyclohydrolase II
L2_040_124G1_scaffold_292_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17113..17757)
DNA (645bp) protein (215aa)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:KIE46277.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KIE46277.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TGU8_9FIRM
hypothetical protein
L2_040_124G1_scaffold_292_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17762..18829)
DNA (1068bp) protein (356aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NIG6_9FIRM
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RibD; pyrimidine reductase, riboflavin biosynthesis
L2_040_124G1_scaffold_292_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19349..19849)
DNA (501bp) protein (167aa)
Uncharacterized protein n=5 Tax=Clostridium botulinum RepID=C3L352_CLOB6
Uncharacterized protein {ECO:0000313|EMBL:KIE46326.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_292_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20021..20410)
DNA (390bp) protein (130aa)
ABC transporter permease protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B5C4_CLOA9
Putative membrane protein {ECO:0000313|EMBL:KIE46252.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter permease
L2_040_124G1_scaffold_292_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20530..20898)
DNA (369bp) protein (123aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B155_CLOA9
ABC transporter family protein {ECO:0000313|EMBL:KIE46186.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter ATP-binding protein
L2_040_124G1_scaffold_292_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20879..21169)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46464.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Displaying items 1-30 of 49 in total

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