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L2_040_124G1_scaffold_298

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_298_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

315..485
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE45505.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_298_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

586..1059
DNA (474bp) protein (158aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Clostridium tunisiense RepID=UPI00031F8446
L2_040_124G1_scaffold_298_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1150..1587)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288745F
Uncharacterized protein {ECO:0000313|EMBL:KIE45310.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_298_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1823..3118
DNA (1296bp) protein (432aa)
Peptidase, S41 family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAQ8_9FIRM
Peptidase S41 family protein {ECO:0000313|EMBL:KIE45484.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
peptidase
L2_040_124G1_scaffold_298_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3161..4459
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZFN4_9CLOT
Dynamin family protein {ECO:0000313|EMBL:KIE45311.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
protein of unknown function DUF265
L2_040_124G1_scaffold_298_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4448..6085)
DNA (1638bp) protein (546aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Hydroxylamine reductase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PYP5_9CLOT
hybrid cluster protein
L2_040_124G1_scaffold_298_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6278..6793)
DNA (516bp) protein (172aa)
lipoprotein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028876AF
Sporulation lipoYhcN/YlaJ family protein {ECO:0000313|EMBL:KIE45486.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_298_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6928..7149)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002FC4ED9
Uncharacterized protein {ECO:0000313|EMBL:KIE45394.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_298_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7288..7446)
DNA (159bp) protein (53aa)
Rubredoxin n=1 Tax=Clostridium sp. BL8 RepID=T0N3C7_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rd; rubredoxin
L2_040_124G1_scaffold_298_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7925..8923)
DNA (999bp) protein (333aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
argF3; ornithine carbamoyltransferase (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D148
L2_040_124G1_scaffold_298_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8952..10160)
DNA (1209bp) protein (403aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
arcA-1; arginine deiminase (EC:3.5.3.6)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030F3446
L2_040_124G1_scaffold_298_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10312..11256)
DNA (945bp) protein (315aa)
arcC; carbamate kinase (EC:2.7.2.2)
carbamate kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028874F3
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_298_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11507..12085)
DNA (579bp) protein (193aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
orotate phosphoribosyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288C4E9
L2_040_124G1_scaffold_298_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12167..13063)
DNA (897bp) protein (299aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
diguanylate cyclase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028831D4
dihydroorotate dehydrogenase 1B
L2_040_124G1_scaffold_298_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13089..13838)
DNA (750bp) protein (250aa)
diguanylate cyclase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D63E
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pyrK; dihydroorotate dehydrogenase electron transfer subunit
L2_040_124G1_scaffold_298_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13844..14713)
DNA (870bp) protein (290aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
orotidine 5''''-phosphate decarboxylase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002899ACE
orotidine 5'-phosphate decarboxylase
L2_040_124G1_scaffold_298_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14839..16035)
DNA (1197bp) protein (399aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00088289};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
dihydroorotase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288CB9C
dihydroorotase, multifunctional complex type
L2_040_124G1_scaffold_298_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16061..16501)
DNA (441bp) protein (147aa)
aspartate carbamoyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002891D62
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:KIE45581.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
aspartate carbamoyltransferase regulatory chain (PyrI)
L2_040_124G1_scaffold_298_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16522..17442)
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
aspartate carbamoyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288F82A
L2_040_124G1_scaffold_298_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18263..18562
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PGX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE45596.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
HesB-like domain-containing protein
L2_040_124G1_scaffold_298_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18621..19523)
DNA (903bp) protein (301aa)
Hdig domain protein n=2 Tax=Clostridium botulinum RepID=C5VQE5_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:KIE45631.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
metal dependent phosphohydrolase
L2_040_124G1_scaffold_298_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19617..20267)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002880ABF
Uncharacterized protein {ECO:0000313|EMBL:KIE45563.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_298_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21318..21560
DNA (243bp) protein (81aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI00028964F7
Transcriptional regulator, AbrB family domain protein {ECO:0000313|EMBL:KIE45378.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
AbrB family transcriptional regulator
L2_040_124G1_scaffold_298_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21912..23069)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002888742
NlpC/P60 family protein {ECO:0000313|EMBL:KIE45323.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
protein P54
L2_040_124G1_scaffold_298_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23248..24090)
DNA (843bp) protein (281aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium sp. BL8 RepID=T0PNI2_9CLOT
S-adenosylmethionine-dependent methyltransferase, YraL family
L2_040_124G1_scaffold_298_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24112..24858)
DNA (747bp) protein (249aa)
SAM-dependent methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D988
Met-10+ like-family protein {ECO:0000313|EMBL:KIE45353.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative O-methyltransferase
L2_040_124G1_scaffold_298_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25579..26001
DNA (423bp) protein (141aa)
murein hydrolase transporter LrgA n=1 Tax=Clostridium sp. JC122 RepID=UPI00028807A9
LrgA family protein {ECO:0000313|EMBL:KIE45362.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
LrgA family protein
L2_040_124G1_scaffold_298_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25962..26663
DNA (702bp) protein (234aa)
membrane protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A2D28
LrgB-like family protein {ECO:0000313|EMBL:KIE45524.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative effector of murein hydrolase
L2_040_124G1_scaffold_298_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26722..27381
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028829FC
PIN domain protein {ECO:0000313|EMBL:KIE45443.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_298_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27461..28339)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E62814
LysM domain protein {ECO:0000313|EMBL:KIE45534.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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