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L2_040_124G1_scaffold_341

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_341_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..314
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00036A91C3
Diguanylate cyclase domain protein {ECO:0000313|EMBL:KIE45389.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
response regulator receiver modulated diguanylate cyclase
L2_040_124G1_scaffold_341_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(407..607)
DNA (201bp) protein (67aa)
Cold shock protein cspB n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q381_CLONN
Cold shock protein CspB {ECO:0000313|EMBL:KIE45564.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cspB; cold shock protein cspB
L2_040_124G1_scaffold_341_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

933..3059
DNA (2127bp) protein (709aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:KIE45325.1}; EC=1.17.4.2 {ECO:0000313|EMBL:KIE45325.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ribonucleoside triphosphate reductase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289F4EC
anaerobic ribonucleoside-triphosphate reductase
L2_040_124G1_scaffold_341_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3265..3777
DNA (513bp) protein (171aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ribonucleoside-triphosphate reductase activating protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002880FC2
nrdG; hypothetical protein
L2_040_124G1_scaffold_341_5
unknown

Not on your lists

3989..4108
DNA (120bp) protein (40aa)

This feature has no annotations

L2_040_124G1_scaffold_341_6
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4246..4413
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI8_CLOSA
hypothetical protein
Zn-dependent protease {ECO:0000313|EMBL:KGM92855.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
L2_040_124G1_scaffold_341_7
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4416..4541
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9EXM2_CLOSG
Zn-dependent protease {ECO:0000313|EMBL:KGM92855.1}; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4552.;"
hypothetical protein
L2_040_124G1_scaffold_341_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4598..5164
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI8_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX44548.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L2_040_124G1_scaffold_341_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5269..5904)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MY55_9CLOT
Beta-lactamase superfamily domain protein {ECO:0000313|EMBL:KIE45339.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_341_10
unknown

Not on your lists

6214..6609
DNA (396bp) protein (132aa)

This feature has no annotations

L2_040_124G1_scaffold_341_11
unknown

Not on your lists

6710..6973
DNA (264bp) protein (88aa)

This feature has no annotations

L2_040_124G1_scaffold_341_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7717..10821
DNA (3105bp) protein (1035aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. BL8 RepID=T0PRE4_9CLOT
isoleucyl-tRNA synthetase
L2_040_124G1_scaffold_341_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11124..11225
DNA (102bp) protein (34aa)
Putative membrane protein {ECO:0000313|EMBL:KIE45560.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_341_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11328..12323
DNA (996bp) protein (332aa)
catabolite control protein A n=1 Tax=Clostridium sp. JC122 RepID=UPI0002893197
Bacterial regulatory s, lacI family protein {ECO:0000313|EMBL:KIE45371.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulator, LacI family
L2_040_124G1_scaffold_341_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12802..13548
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZI26_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KIE45467.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_341_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13874..15361)
DNA (1488bp) protein (496aa)
iron hydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002886C5F
[FeFe] hydrogenase, group B1/B3 family protein {ECO:0000313|EMBL:KIE45614.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
4Fe-4S binding domain protein
L2_040_124G1_scaffold_341_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..20196
DNA (4029bp) protein (1343aa)
Superfamily I DNA helicase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289B7A5
PhoH-like family protein {ECO:0000313|EMBL:KIE45347.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_341_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20656..21027
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289C40B
Uncharacterized protein {ECO:0000313|EMBL:KIE45346.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_341_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21204..22907
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DBEFFA
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein {ECO:0000313|EMBL:KIE45600.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
L2_040_124G1_scaffold_341_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23414..24850
DNA (1437bp) protein (479aa)
polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289FE28
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KIE45569.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
polysaccharide biosynthesis family protein
L2_040_124G1_scaffold_341_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24969..26402
DNA (1434bp) protein (478aa)
polysaccharide biosynthesis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289FE28
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:KIE45569.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
polysaccharide biosynthesis family protein
L2_040_124G1_scaffold_341_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26839..27810
DNA (972bp) protein (324aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
metN3; Methionine import ATP-binding protein MetN (EC:3.6.3.-)
ABC transporter related n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SRE8_CLOC7
L2_040_124G1_scaffold_341_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27803..28462
DNA (660bp) protein (220aa)
Putative D-methionine transport system permease protein MetI n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QBQ2_9CLOT
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KIE45655.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
binding-protein-dependent transport system inner membrane protein
L2_040_124G1_scaffold_341_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28479..29270
DNA (792bp) protein (264aa)
Lipoprotein n=2 Tax=Clostridium kluyveri RepID=A5N1C8_CLOK5
Lipo, YaeC family protein {ECO:0000313|EMBL:KIE45327.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
lipoprotein
L2_040_124G1_scaffold_341_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29622..29855)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE48399.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Phage related protein id=2273476 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
phage-like protein
L2_040_124G1_scaffold_341_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29869..30204)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003612F60
Sigma-70, region 4 family protein {ECO:0000313|EMBL:KIE45465.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase sigma factor, sigma-70 family protein
L2_040_124G1_scaffold_341_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30197..30397)
DNA (201bp) protein (67aa)
TcdD protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MK73_9FIRM
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KIE44354.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
RNA polymerase sigma factor, sigma-70 family
L2_040_124G1_scaffold_341_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

30761..32071
DNA (1311bp) protein (437aa)
Radical SAM domain protein n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R5R8_9THEO
Arylsulfatase regulator (Fe-S oxidoreductase) {ECO:0000313|EMBL:KKC29902.1}; Radical SAM domain protein {ECO:0000313|EMBL:EEB76721.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
AslB2; arylsulfatase
L2_040_124G1_scaffold_341_29
unknown

Not on your lists

32232..32348
DNA (117bp) protein (39aa)

This feature has no annotations

L2_040_124G1_scaffold_341_30
unknown

Not on your lists

comp(32682..32987)
DNA (306bp) protein (102aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

View Taxonomy