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L2_040_124G1_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_376_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..98
DNA (96bp) protein (32aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=592027 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 1873.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CUU9_CLOPF
L2_040_124G1_scaffold_376_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(174..1247)
DNA (1074bp) protein (358aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EHX1_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERI94177.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
int; ICEBs1 integrase
L2_040_124G1_scaffold_376_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1267..1767)
DNA (501bp) protein (167aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DCV8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI94178.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
putative transcription factor, MBF1 like protein
L2_040_124G1_scaffold_376_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2058..2258
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CUG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94179.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
phage protein
L2_040_124G1_scaffold_376_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2462..2920
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94180.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_040_124G1_scaffold_376_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3001..3408
DNA (408bp) protein (136aa)
Phage regulatory , Rha family protein n=5 Tax=Clostridium difficile RepID=T3STK9_CLODI
Phage regulatory , Rha family protein {ECO:0000313|EMBL:EQE68076.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
phage regulatory protein, Rha family
L2_040_124G1_scaffold_376_7
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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3558..4709
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EMK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94181.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_040_124G1_scaffold_376_8
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4896..5018)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EHX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94182.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_040_124G1_scaffold_376_9
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5285..5761)
DNA (477bp) protein (159aa)
Transcriptional regulator, PadR family n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DCX2_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ERI94183.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
putative transcriptional regulator
L2_040_124G1_scaffold_376_10
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6560..7027)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DBL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94185.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_040_124G1_scaffold_376_11
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7397..8512)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EML9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94186.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
L2_040_124G1_scaffold_376_12
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8737..9213)
DNA (477bp) protein (159aa)
Ribonuclease HI n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSN6_9CLOT
Ribonuclease HI {ECO:0000313|EMBL:EKQ55435.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_040_124G1_scaffold_376_13
unknown

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comp(9213..9404)
DNA (192bp) protein (64aa)

This feature has no annotations

L2_040_124G1_scaffold_376_14
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9577..9810
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U300_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55436.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_040_124G1_scaffold_376_15
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9779..12961
DNA (3183bp) protein (1061aa)
DNA/RNA helicase, superfamily II n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U443_9CLOT
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EKQ55437.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
helicase domain-containing protein
L2_040_124G1_scaffold_376_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12973..13695
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T6Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55438.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_040_124G1_scaffold_376_17
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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13709..15616
DNA (1908bp) protein (636aa)
adenine-specific DNA-methyltransferase (EC:2.1.1.72)
Adenine specific DNA methylase Mod n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I8R0N9_9THEO
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:EIW01003.1}; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter siderophilus SR4.;"
L2_040_124G1_scaffold_376_18
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15682..18771
DNA (3090bp) protein (1030aa)
res; type III restriction-modification system EcoPI enzyme Res (EC:3.1.21.5)
Restriction endonuclease n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSP0_9CLOT
Restriction endonuclease {ECO:0000313|EMBL:EKQ55440.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L2_040_124G1_scaffold_376_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19011..21833
DNA (2823bp) protein (941aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XBV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12685.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ATPase
L2_040_124G1_scaffold_376_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21875..22876
DNA (1002bp) protein (334aa)
Putative 5-methylcytosine-specific restriction enzyme subunit McrC n=1 Tax=Clostridium ultunense Esp RepID=M1ZA59_9CLOT
Putative 5-methylcytosine-specific restriction enzyme subunit McrC {ECO:0000313|EMBL:CCQ94749.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
McrBC 5-methylcytosine restriction system component
L2_040_124G1_scaffold_376_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22932..23450
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TSP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55445.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L2_040_124G1_scaffold_376_22
unknown

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23466..23603
DNA (138bp) protein (46aa)

This feature has no annotations

L2_040_124G1_scaffold_376_23
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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23797..24144
DNA (348bp) protein (116aa)
Helix-turn-helix domain protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0K7_THEOJ
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADL08865.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L2_040_124G1_scaffold_376_24
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24111..24923
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037A3797
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL08864.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L2_040_124G1_scaffold_376_25
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24913..25470
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003607FEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL08863.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
L2_040_124G1_scaffold_376_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26368..26607
DNA (240bp) protein (80aa)
Peptidase domain protein n=2 Tax=Clostridium botulinum RepID=C1FR97_CLOBJ
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:KIE47499.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
peptidase domain-containing protein
L2_040_124G1_scaffold_376_27
unknown

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26734..26958
DNA (225bp) protein (75aa)

This feature has no annotations

L2_040_124G1_scaffold_376_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27405..28673
DNA (1269bp) protein (423aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M636_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:KIE47071.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative transcriptional regulator
L2_040_124G1_scaffold_376_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28829..28984
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46835.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_376_30
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29643..29942
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46924.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Displaying items 1-30 of 34 in total

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