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L2_040_124G1_scaffold_438

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_438_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1037
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PC82_9CLOT
Flavo, family protein {ECO:0000313|EMBL:KIE47988.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
HI0933 family protein
L2_040_124G1_scaffold_438_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1040..1396
DNA (357bp) protein (119aa)
Chorismate mutase {ECO:0000313|EMBL:KIE48064.1}; EC=5.4.99.5 {ECO:0000313|EMBL:KIE48064.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
chorismate mutase (EC:5.4.99.5)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MYB0_9CLOT
L2_040_124G1_scaffold_438_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1428..2096
DNA (669bp) protein (223aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238, ECO:0000256|SAAS:SAAS00098295};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cmk; cytidylate kinase (EC:2.7.4.14)
cytidylate kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002884046
L2_040_124G1_scaffold_438_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2151..4073
DNA (1923bp) protein (641aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|SAAS:SAAS00096570};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00037D45A3
hydroxymethylbutenyl pyrophosphate reductase
L2_040_124G1_scaffold_438_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4282..5136
DNA (855bp) protein (285aa)
acetyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287F10C
Acetyltransferase domain protein {ECO:0000313|EMBL:KIE48146.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
acetyltransferase
L2_040_124G1_scaffold_438_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5384..6580)
DNA (1197bp) protein (399aa)
aspB_1; aspartate aminotransferase (EC:2.6.1.1)
aspartate aminotransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000287E0B6
Beta-eliminating lyase family protein {ECO:0000313|EMBL:KIE48128.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_438_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6601..6783)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE48072.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_438_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7880..9205
DNA (1326bp) protein (442aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A3E15
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase
L2_040_124G1_scaffold_438_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9325..12018
DNA (2694bp) protein (898aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. JC122 RepID=UPI000287BE1D
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
DNA mismatch repair protein MutS
L2_040_124G1_scaffold_438_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12048..13964
DNA (1917bp) protein (639aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. JC122 RepID=UPI000289D58A
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
DNA mismatch repair protein MutL
L2_040_124G1_scaffold_438_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13982..14926
DNA (945bp) protein (315aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289BA95
L2_040_124G1_scaffold_438_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15006..15254
DNA (249bp) protein (83aa)
RNA-binding protein Hfq n=1 Tax=Clostridium sp. JC122 RepID=UPI000288CA7F
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hfq; RNA-binding protein Hfq
L2_040_124G1_scaffold_438_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15446..16729
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000287C21C
Aluminum resistance protein {ECO:0000313|EMBL:KIE48057.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
aluminum resistance protein
L2_040_124G1_scaffold_438_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16759..17367)
DNA (609bp) protein (203aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
lexA; LexA repressor (EC:3.4.21.88)
umuDC operon protein-like protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D84979
L2_040_124G1_scaffold_438_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17551..18810
DNA (1260bp) protein (420aa)
helicase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288F5A1
Uncharacterized protein {ECO:0000313|EMBL:KIE48125.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
DEAD/DEAH box helicase
L2_040_124G1_scaffold_438_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18969..20582
DNA (1614bp) protein (538aa)
heme ABC transporter ATP-binding protein n=1 Tax=Clostridium tunisiense RepID=UPI0003165718
ABC transporter family protein {ECO:0000313|EMBL:KIE48164.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter related protein
L2_040_124G1_scaffold_438_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21034..22728
DNA (1695bp) protein (565aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
arginyl-tRNA synthetase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002889179
L2_040_124G1_scaffold_438_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22944..23549
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=2 Tax=Clostridiales RepID=B0ACM5_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rpsD2; 30S ribosomal protein S4 B
L2_040_124G1_scaffold_438_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23974..25077
DNA (1104bp) protein (368aa)
Putative signal transduction histidine kinase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTF6_THESW
Histidine kinase family protein {ECO:0000313|EMBL:KIE48178.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative signal transduction histidine kinase
L2_040_124G1_scaffold_438_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25087..25716
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTF7_THESW
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KIE48175.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
LuxR family two component transcriptional regulator
L2_040_124G1_scaffold_438_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26013..26948
DNA (936bp) protein (312aa)
ABC transporter related n=2 Tax=Thermoanaerobacter RepID=B0KBI7_THEP3
ABC transporter family protein {ECO:0000313|EMBL:KIE48095.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter-like protein
L2_040_124G1_scaffold_438_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26962..28080
DNA (1119bp) protein (373aa)
ABC transporter permease n=1 Tax=Bacillus sp. 123MFChir2 RepID=UPI00036C91B8
ABC-2 type transporter family protein {ECO:0000313|EMBL:KIE48068.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cytolysin ABC transporter precursor
L2_040_124G1_scaffold_438_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28082..29221
DNA (1140bp) protein (380aa)
ABC-2 type transporter n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTF5_THESW
ABC-2 type transporter family protein {ECO:0000313|EMBL:KIE48036.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC transporter
L2_040_124G1_scaffold_438_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29567..29776
DNA (210bp) protein (70aa)
FeoA domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SH43_CLOSG
FeoA domain protein {ECO:0000313|EMBL:KIE48055.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ferrous iron transport protein A
L2_040_124G1_scaffold_438_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29792..30013
DNA (222bp) protein (74aa)
FeoA family protein n=13 Tax=Clostridium botulinum RepID=A7GC72_CLOBL
ferrous iron transport protein A
Putative ferrous iron transport protein A {ECO:0000313|EMBL:CAL82582.1}; TaxID=441771 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A).;"
L2_040_124G1_scaffold_438_26
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30045..30215
DNA (171bp) protein (57aa)
Ferrous iron transport protein B n=1 Tax=Clostridium botulinum (strain Kyoto / Type A2) RepID=C1FJY4_CLOBJ
feoB; ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ACO84435.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
Displaying 26 items

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