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L2_040_124G1_scaffold_548

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_548_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..251)
DNA (249bp) protein (83aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sensor histidine kinase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288493D
sensor histidine kinase
L2_040_124G1_scaffold_548_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(233..946)
DNA (714bp) protein (238aa)
Transcriptional regulator n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ENQ2_CLOPA
Uncharacterized protein {ECO:0000313|EMBL:KIE47993.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
spaR; transcriptional regulatory protein SpaR
L2_040_124G1_scaffold_548_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1213..2061)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002894A1A
Putative peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:KIE48087.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_548_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2315..4165)
DNA (1851bp) protein (617aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
DNA topoisomerase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028806F7
DNA topoisomerase
L2_040_124G1_scaffold_548_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4292..5329
DNA (1038bp) protein (346aa)
threonine aldolase (EC:4.1.2.5)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002D5C2C9
L-allo-threonine aldolase {ECO:0000313|EMBL:KIE48140.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_548_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5381..6019)
DNA (639bp) protein (213aa)
Pyrophosphatase ppaX {ECO:0000313|EMBL:KIE48183.1}; EC=3.6.1.1 {ECO:0000313|EMBL:KIE48183.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F9105D
HAD-superfamily hydrolase, subfamily IA, variant 3
L2_040_124G1_scaffold_548_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6006..6749)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E407CD
SprT-like family protein {ECO:0000313|EMBL:KIE48012.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_548_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6962..9238)
DNA (2277bp) protein (759aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NBF3_9CLOT
von Willebrand factor type A domain protein {ECO:0000313|EMBL:KIE48024.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
von Willebrand factor type A domain protein
L2_040_124G1_scaffold_548_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9423..10367)
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030789EA
Membrane dipeptidase family protein {ECO:0000313|EMBL:KIE48155.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Zn-dependent dipeptidase, microsomal dipeptidase
L2_040_124G1_scaffold_548_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10542..11534)
DNA (993bp) protein (331aa)
KWG repeat-containing protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002898957
WG containing repeat family protein {ECO:0000313|EMBL:KIE48120.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
KWG Leptospira repeat protein
L2_040_124G1_scaffold_548_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11669..12880
DNA (1212bp) protein (404aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002F49577
phosphofructokinase
L2_040_124G1_scaffold_548_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12963..14300)
DNA (1338bp) protein (446aa)
Amino acid permease n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CY55_9FIRM
Amino acid permease family protein {ECO:0000313|EMBL:KIE48163.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
amino acid permease
L2_040_124G1_scaffold_548_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14685..15356)
DNA (672bp) protein (224aa)
Prepilin peptidase, type IV n=1 Tax=Clostridium novyi (strain NT) RepID=A0PZ81_CLONN
Type IV leader peptidase family protein {ECO:0000313|EMBL:KIE48171.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
prepilin peptidase, type IV
L2_040_124G1_scaffold_548_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15371..15802)
DNA (432bp) protein (144aa)
pilin family protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000289BBC1
Uncharacterized protein {ECO:0000313|EMBL:KIE48142.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative type IV pilin
L2_040_124G1_scaffold_548_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15987..17681)
DNA (1695bp) protein (565aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Adenine deaminase n=1 Tax=Clostridium sp. BL8 RepID=T0PI58_9CLOT
adenine deaminase
L2_040_124G1_scaffold_548_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17701..18114)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A2B6E
Uncharacterized protein {ECO:0000313|EMBL:KIE48029.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_548_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18357..19097
DNA (741bp) protein (247aa)
transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI000289CF28
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KIE48129.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
transcriptional regulator
L2_040_124G1_scaffold_548_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19226..20164)
DNA (939bp) protein (313aa)
malate transporter n=1 Tax=Clostridium sp. JC122 RepID=UPI0002897094
Permease {ECO:0000313|EMBL:KAJ51719.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
permease
L2_040_124G1_scaffold_548_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20369..20743)
DNA (375bp) protein (125aa)
molybdopterin oxidoreductase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289F44B
Uncharacterized protein {ECO:0000313|EMBL:KAJ51718.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
hypothetical protein
L2_040_124G1_scaffold_548_20
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20740..21981)
DNA (1242bp) protein (414aa)
pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A3E1C
Thioredoxin reductase {ECO:0000313|EMBL:KAJ51717.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
thioredoxin reductase
L2_040_124G1_scaffold_548_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21981..23438)
DNA (1458bp) protein (486aa)
glycerol-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D95B
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KIE48104.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
putative dehydrogenase
L2_040_124G1_scaffold_548_22
unknown

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comp(24103..24174)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 22 items

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