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L2_040_124G1_scaffold_622

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_622_1
unknown

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259..444
DNA (186bp) protein (62aa)

This feature has no annotations

L2_040_124G1_scaffold_622_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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871..2157
DNA (1287bp) protein (429aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:KIE45075.1}; EC=6.1.1.23 {ECO:0000313|EMBL:KIE45075.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
aspC; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspartyl-tRNA synthetase n=1 Tax=Clostridium tunisiense RepID=UPI00031E1BEE
L2_040_124G1_scaffold_622_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2200..2598)
DNA (399bp) protein (133aa)
Large-conductance mechanosensitive channel n=1 Tax=Clostridium histolyticum RepID=MSCL_CLOHI
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
mscL; large-conductance mechanosensitive channel
L2_040_124G1_scaffold_622_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2792..3802
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288B2BA
Uncharacterized protein {ECO:0000313|EMBL:KIE45240.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_622_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3955..4311
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7TB07_CLOSG
CutA1 divalent ion tolerance family protein {ECO:0000313|EMBL:KIE44581.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_622_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4402..7011)
DNA (2610bp) protein (870aa)
alcohol dehydrogenase (EC:1.2.1.10 1.1.1.1)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030D0398
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_622_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7211..8080
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00037B4B53
Radical SAM superfamily protein {ECO:0000313|EMBL:KIE44742.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase
L2_040_124G1_scaffold_622_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8190..8396
DNA (207bp) protein (69aa)
cold-shock protein n=1 Tax=Clostridium tunisiense RepID=UPI000309EF1A
'Cold-shock' DNA-binding domain protein {ECO:0000313|EMBL:KIE44575.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cold-shock protein
L2_040_124G1_scaffold_622_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8562..9167
DNA (606bp) protein (202aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030E607B
5-formyltetrahydrofolate cyclo-ligase
L2_040_124G1_scaffold_622_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9420..10694
DNA (1275bp) protein (425aa)
membrane protein n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D204
UPF0597 protein U732_443 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_622_11
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10773..12227)
DNA (1455bp) protein (485aa)
dipeptidase PepV n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D49C
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases {ECO:0000313|EMBL:CDF59123.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
efflux ABC transporter ATP-binding protein
L2_040_124G1_scaffold_622_12
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12641..13378
DNA (738bp) protein (246aa)
Response regulator receiver domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1S6_9CLOT
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:EET84543.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
putative two-component transcriptional regulator response regulator component
L2_040_124G1_scaffold_622_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13389..14690
DNA (1302bp) protein (434aa)
Putative transmembrane ATPase n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZQP6_CLOB0
putative transmembrane ATPase
VirS homolog {ECO:0000313|EMBL:ACO87059.1}; TaxID=536232 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Kyoto / Type A2).;"
L2_040_124G1_scaffold_622_14
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14925..15485
DNA (561bp) protein (187aa)
Accessory gene regulator B n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1V6_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:EET84532.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Accessory gene regulator B.
L2_040_124G1_scaffold_622_15
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15813..16373
DNA (561bp) protein (187aa)
Accessory gene regulator B n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q1V6_9CLOT
Accessory gene regulator B {ECO:0000313|EMBL:EET84532.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L2_040_124G1_scaffold_622_16
unknown

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16395..16523
DNA (129bp) protein (43aa)

This feature has no annotations

L2_040_124G1_scaffold_622_17
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16827..18764)
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
threonyl-tRNA synthase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002886DFA
thrS; threonyl-tRNA synthetase
L2_040_124G1_scaffold_622_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19277..21184)
DNA (1908bp) protein (636aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Threonine--tRNA ligase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y5D6_9FIRM
threonyl-tRNA synthetase
Displaying 18 items

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