ggKbase home page

L2_040_124G1_scaffold_239_2

Organism: dasL2_040_124G1_metabat_metabat_4_fa_fa

near complete RP 42 / 55 MC: 1 BSCG 46 / 51 MC: 4 ASCG 13 / 38 MC: 1
Location: comp(1267..2625)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma54 factor n=1 Tax=Clostridium sp. JC122 RepID=UPI0002892A44 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 455.0
  • Bit_score: 577
  • Evalue 1.10e-161
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:KIE46451.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 452.0
  • Bit_score: 774
  • Evalue 6.80e-221
rpoN; RNA polymerase factor sigma-54 similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 458.0
  • Bit_score: 496
  • Evalue 4.20e-138

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium argentinense → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1359
GTGAGTTTGAATTTTGATTTAAAGCTTACAATGGAACAAAAATTAGTTATGACTATGGAGATGCAGTTGTCAGTAAAGCTTCTACAAATGTCTTCTTATGATTTATTAAAGCATATAAATAAGGAATTAGAAGAAAATATAGCCTTAGAAGTAAAGTCAAAAGAAATCGATGAATTAAAAAAAGAAGAGATTAATTATTCAAAGTTTATAAAACATTTAGAAAATGGCAACAAAACCTTCGAATATGGATATAAAGATGAAGAAGTTTCTCCTTTAAACTTCATTTCTGTAAAAAAGAGTTTAAAAGATTTATTAAAAGAACAGTTAATGGAAATAAATCTTGAAAAATCAATAATAGATTTATGTAACTATATGGTTGAATGTATAGATGAGAGGGGATATTTAAATACTTCATTGGAAGAGATAGCATATATTAAAAAACAGCCATTAAGTCATTGTGAAAAAGCTTTGATGGTAATTCAAGATTTAGAACCTATAGGTGTAGGAGCTTGGGATTTAAAAGAGTGTCTAAAGATACAATTAGACAAAAAAGGGTTAAAAAATTCACATATATATGAAATTATAGAGGAACATTTAGAGTTGGTTTCTAAAAACAAATATAATGACATAGCTAAAAAATTAAAAATAGACAGTAAAACTGTTCAAGATTATGTAGATATAATTAGAACTTTAGAACCTAAGCCCTCAAGAGGATATTTTACAGGAGAAGAAACAAATTATATTATTCCTGATGCTACTATAAAAAGAATAGATGATGAATTTATAATCATTATGAATGACTCTGTTTTACCTAGGTTAAACGTAAACAATATGTATAAAGAAATATTAAATAACAGTAAAGAAAAAGAAGTAGTAGATTATGTAAAAGAAAAAATGAATAAGGCAATGTTTTTAATAAAAAGCATAGATGAAAGAAGAAACACATTATATAAAGTTATAGAAGAAATAATTTCTCTTCAAAAAACTTATTTTATGTATGGAGAGGATTATTTAAAGCCTATGACCATAAGAGATATAGCAGATAACATAAATTTTCATGAATCTACAGTAAGTAGAGCTATAAAAGATAAATATATTGCTCTTCACACTGGTAAAGTAATTAGAATAAAAGACCTTTTTACCAATTCTTTAAATAGTGTAAATGACGATATTTCAACTAATAGTATAAAGAAAAGAATTAAAGAAATAATAGAGAATGAGAATAAGAAAAAACCATTTTCTGATTCAACTATATGCAATATATTACATAATGAAGGAATAATGATTTCAAGAAGAACTATAGCCAAATATAGAGAACAATTAGGAATTTTTAGCTCTTCTCAAAGAAAACGATTATAA
PROTEIN sequence
Length: 453
VSLNFDLKLTMEQKLVMTMEMQLSVKLLQMSSYDLLKHINKELEENIALEVKSKEIDELKKEEINYSKFIKHLENGNKTFEYGYKDEEVSPLNFISVKKSLKDLLKEQLMEINLEKSIIDLCNYMVECIDERGYLNTSLEEIAYIKKQPLSHCEKALMVIQDLEPIGVGAWDLKECLKIQLDKKGLKNSHIYEIIEEHLELVSKNKYNDIAKKLKIDSKTVQDYVDIIRTLEPKPSRGYFTGEETNYIIPDATIKRIDDEFIIIMNDSVLPRLNVNNMYKEILNNSKEKEVVDYVKEKMNKAMFLIKSIDERRNTLYKVIEEIISLQKTYFMYGEDYLKPMTIRDIADNINFHESTVSRAIKDKYIALHTGKVIRIKDLFTNSLNSVNDDISTNSIKKRIKEIIENENKKKPFSDSTICNILHNEGIMISRRTIAKYREQLGIFSSSQRKRL*