ggKbase home page

L2_040_124G1_scaffold_239

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_124G1_scaffold_239_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84..1154)
DNA (1071bp) protein (357aa)
transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002895F2B
Putative sugar-binding domain protein {ECO:0000313|EMBL:KIE46176.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cggR; central glycolytic genes regulator
L2_040_124G1_scaffold_239_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1267..2625)
DNA (1359bp) protein (453aa)
RNA polymerase sigma54 factor n=1 Tax=Clostridium sp. JC122 RepID=UPI0002892A44
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:KIE46451.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
rpoN; RNA polymerase factor sigma-54
L2_040_124G1_scaffold_239_3
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2888..3355)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46290.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L2_040_124G1_scaffold_239_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3689..5143
DNA (1455bp) protein (485aa)
Putative hydrolase with cell wall binding domains n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GI76_CLOLD
Cell wall binding repeat 2 family protein {ECO:0000313|EMBL:KIE46092.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hydrolase
L2_040_124G1_scaffold_239_5
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5318..6244)
DNA (927bp) protein (309aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q3B2_CLONN
CAAX protease self-immunity family protein {ECO:0000313|EMBL:KIE46067.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
CAAX amino terminal protease
L2_040_124G1_scaffold_239_6
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6529..7140)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XS86_DESHA
Uncharacterized protein {ECO:0000313|EMBL:KIE46350.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_239_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7545..8477)
DNA (933bp) protein (311aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Clostridium tunisiense RepID=UPI000315360E
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KIE46032.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sugar ABC transporter permease
L2_040_124G1_scaffold_239_8
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8470..9546)
DNA (1077bp) protein (359aa)
sugar ABC transporter permease n=1 Tax=Clostridium sp. JC122 RepID=UPI000288DA71
Branched-chain amino acid transport system / permease component family protein {ECO:0000313|EMBL:KIE46526.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sugar ABC transporter permease
L2_040_124G1_scaffold_239_9
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9536..11080)
DNA (1545bp) protein (515aa)
heme ABC transporter ATP-binding protein n=1 Tax=Clostridium tunisiense RepID=UPI00030625FB
ABC transporter family protein {ECO:0000313|EMBL:KIE46511.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
sugar ABC transporter ATP-binding protein
L2_040_124G1_scaffold_239_10
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11306..12406)
DNA (1101bp) protein (367aa)
bmp family lipoprotein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028885CD
Basic membrane family protein {ECO:0000313|EMBL:KIE46269.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Bmp family lipoprotein
L2_040_124G1_scaffold_239_11
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12705..13871)
DNA (1167bp) protein (389aa)
Glycine/sarcosine/betaine reductase complex component C subunit alpha {ECO:0000313|EMBL:KIE46421.1}; EC=1.21.4.4 {ECO:0000313|EMBL:KIE46421.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycine/sarcosine/betaine reductase complex protein C subunit alpha n=1 Tax=Clostridium sp. JC122 RepID=UPI000288D40E
fatty acid/phospholipid synthesis protein PlsX
L2_040_124G1_scaffold_239_12
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13938..15476)
DNA (1539bp) protein (513aa)
Glycine/sarcosine/betaine reductase complex component C subunit beta {ECO:0000313|EMBL:KIE46140.1}; EC=1.21.4.4 {ECO:0000313|EMBL:KIE46140.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycine/sarcosine/betaine reductase complex protein C subunit beta n=1 Tax=Clostridium tunisiense RepID=UPI0002FD806E
Betaine reductase
L2_040_124G1_scaffold_239_13
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

15660..16070
DNA (411bp) protein (137aa)
Tax=RBG_16_Chloroflexi_57_8_curated
L2_040_124G1_scaffold_239_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15956..17065)
DNA (1110bp) protein (370aa)
Glycine reductase complex component B subunit gamma {ECO:0000313|EMBL:KIE46388.1}; EC=1.21.4.2 {ECO:0000313|EMBL:KIE46388.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
beta-aspartate methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI0002896924
selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family
L2_040_124G1_scaffold_239_15
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17111..17437)
DNA (327bp) protein (109aa)
Glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:KIE46184.1}; EC=1.21.4.4 {ECO:0000313|EMBL:KIE46184.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
glycine/sarcosine/betaine reductase complex component A2 n=1 Tax=Clostridium sp. JC122 RepID=UPI000289F5EA
Sarcosine reductase
L2_040_124G1_scaffold_239_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17453..17578)
DNA (126bp) protein (42aa)
Glycine/sarcosine/betaine reductase complex component A {ECO:0000313|EMBL:KIE46219.1}; EC=1.21.4.4 {ECO:0000313|EMBL:KIE46219.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Glycine/sarcosine/betaine reductase complex protein A n=1 Tax=Clostridium sp. BL8 RepID=T0PQR6_9CLOT
glycine/sarcosine/betaine reductase complex protein A
L2_040_124G1_scaffold_239_17
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17623..18909)
DNA (1287bp) protein (429aa)
Glycine reductase complex component B subunits alpha and beta {ECO:0000313|EMBL:KIE46251.1}; EC=1.21.4.2 {ECO:0000313|EMBL:KIE46251.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
beta-aspartyl peptidase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288FC84
Sarcosine reductase
L2_040_124G1_scaffold_239_18
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19016..19345)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N5D8_9CLOT
Thioredoxin {ECO:0000313|EMBL:KIE46322.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
Thioredoxin domain protein
L2_040_124G1_scaffold_239_19
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19509..20438)
DNA (930bp) protein (310aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
thioredoxin reductase n=1 Tax=Clostridium tunisiense RepID=UPI0002FFA84F
thioredoxin reductase
L2_040_124G1_scaffold_239_20
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20451..20825)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0NDP4_9CLOT
Putative grdX protein {ECO:0000313|EMBL:KIE46396.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
GrdX protein
L2_040_124G1_scaffold_239_21
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21366..22220)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Clostridium sp. JC122 RepID=UPI0002893DBA
EDD, DegV family domain protein {ECO:0000313|EMBL:KIE46323.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
DegV domain-containing protein CA_C0701
L2_040_124G1_scaffold_239_22
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22234..22701)
DNA (468bp) protein (156aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
tRNA methyltransferase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288E384
tRNA/rRNA methyltransferase (SpoU)
L2_040_124G1_scaffold_239_23
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23041..24942)
DNA (1902bp) protein (634aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z8M4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KIE46518.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_239_24
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24935..27031)
DNA (2097bp) protein (699aa)
RND superfamily exporter n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F157_CLOSG
MMPL family protein {ECO:0000313|EMBL:KIE46135.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
antibiotic ABC transporter permease
L2_040_124G1_scaffold_239_25
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27057..27677)
DNA (621bp) protein (207aa)
TetR family transcriptional regulator n=1 Tax=Clostridium sp. JC122 RepID=UPI0002895C7B
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:KIE46231.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
TetR family transcriptional regulator
L2_040_124G1_scaffold_239_26
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28005..28838)
DNA (834bp) protein (278aa)
HAD family hydrolase n=1 Tax=Clostridium sp. JC122 RepID=UPI000288E76B
HAD hydrolase, IIB family protein {ECO:0000313|EMBL:KIE46082.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
cof family hydrolase
L2_040_124G1_scaffold_239_27
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28971..31307)
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003016262
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KIE46308.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_239_28
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31332..32495)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002EE9D9C
Uncharacterized protein {ECO:0000313|EMBL:KIE46203.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
hypothetical protein
L2_040_124G1_scaffold_239_29
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32488..33531)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N5F1_9CLOT
AAA domain family protein {ECO:0000313|EMBL:KIE46171.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
moxR_1; methanol dehydrogenase regulatory protein(moxR)
L2_040_124G1_scaffold_239_30
unknown

Not on your lists

comp(33719..33916)
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

View Taxonomy