ggKbase home page

L2_040_365G1_scaffold_42

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_42_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(93..770)
DNA (678bp) protein (226aa)
Putative transmembrane protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LI60_BACFN
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:EYB10948.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_040_365G1_scaffold_42_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(767..994)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B153_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01500.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_42_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1650..2414)
DNA (765bp) protein (255aa)
TIGR00159 family protein n=8 Tax=root RepID=A7UY53_BACUN
putative transmembrane protein
DisA bacterial checkpoint controller nucleotide-binding family protein {ECO:0000313|EMBL:EXY92484.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_040_365G1_scaffold_42_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2449..3309)
DNA (861bp) protein (287aa)
Dihydropteroate synthase n=2 Tax=Bacteroides fragilis RepID=I9B1Q0_BACFG
Dihydropteroate synthase {ECO:0000313|EMBL:EIZ01498.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
folP; putative dihydropteroate synthase
L2_040_365G1_scaffold_42_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3421..5436
DNA (2016bp) protein (672aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VDZ5_BACFG
putative two-component system sensor histidine kinase
L2_040_365G1_scaffold_42_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5522..6487)
DNA (966bp) protein (322aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Glutaminase n=9 Tax=Bacteroides RepID=GLSA_BACFN
glsA; putative glutaminase
L2_040_365G1_scaffold_42_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6503..7945)
DNA (1443bp) protein (481aa)
gadB; putative glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Glutamate decarboxylase n=14 Tax=Bacteroides RepID=Q64Z73_BACFR
L2_040_365G1_scaffold_42_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7977..8204
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64Z74_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47202.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L2_040_365G1_scaffold_42_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8207..9442
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=8 Tax=Bacteroides RepID=D1JR75_9BACE
putative transporter/antibiotic resistance protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EYB10939.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_040_365G1_scaffold_42_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9485..10783
DNA (1299bp) protein (433aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=2 Tax=Bacteroides fragilis RepID=I9VDZ9_BACFG
murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-d-alanine ligase
L2_040_365G1_scaffold_42_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10788..11180)
DNA (393bp) protein (131aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C6I212_9BACE
putative transmembrane protein
VanZ like family protein {ECO:0000313|EMBL:EYB10937.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L2_040_365G1_scaffold_42_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11285..12652
DNA (1368bp) protein (456aa)
Transporter n=2 Tax=Bacteroides fragilis RepID=I9B165_BACFG
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative sodium-dependent transporter
L2_040_365G1_scaffold_42_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12655..13557
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VDS5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01489.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_42_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14185..14328)
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B1R0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01488.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L2_040_365G1_scaffold_42_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14461..15483
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VE04_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01487.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_42_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15608..16261)
DNA (654bp) protein (218aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
Lipoprotein-releasing system ATP-binding protein LolD n=2 Tax=Bacteroides fragilis RepID=I9BNZ3_BACFG
lolD; putative ABC transporter ATP-binding protein
L2_040_365G1_scaffold_42_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16266..16994)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B170_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01485.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis
L2_040_365G1_scaffold_42_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16976..19111)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I3HSX8_BACFG
putative Na+/H+ antiporter
Universal stress family protein {ECO:0000313|EMBL:EXY42572.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L2_040_365G1_scaffold_42_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19309..20319
DNA (1011bp) protein (337aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
Aspartate-semialdehyde dehydrogenase n=11 Tax=Bacteroides RepID=Q64Z83_BACFR
aspartate-semialdehyde dehydrogenase
L2_040_365G1_scaffold_42_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20619..21467
DNA (849bp) protein (283aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=Q5LI76_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86562.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_040_365G1_scaffold_42_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21929..25264
DNA (3336bp) protein (1112aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides fragilis RepID=I9BNY8_BACFG
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EIZ01481.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_42_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25294..26991
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B175_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01480.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_42_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27212..28381
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VDT5_BACFG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ80306.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_040_365G1_scaffold_42_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28422..29879
DNA (1458bp) protein (486aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9B1S0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01478.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative cation symporter
L2_040_365G1_scaffold_42_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29882..32953
DNA (3072bp) protein (1024aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VE12_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01477.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
exported xanthan lyase/N-acetylmuramoyl-L-alanine amidase
L2_040_365G1_scaffold_42_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33049..34914
DNA (1866bp) protein (622aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9BNY3_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01476.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative PQQ-binding exported phosphoesterase
L2_040_365G1_scaffold_42_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34938..36404
DNA (1467bp) protein (489aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9B181_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01475.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative glycosyltransferase
L2_040_365G1_scaffold_42_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36401..37333
DNA (933bp) protein (311aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9VDU0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIZ01474.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative glycosyltransferase
L2_040_365G1_scaffold_42_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37330..38685
DNA (1356bp) protein (452aa)
SpoIID/LytB domain-containing protein n=2 Tax=Bacteroides fragilis RepID=I9B1S5_BACFG
SpoIID/LytB domain protein {ECO:0000313|EMBL:EXZ75134.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L2_040_365G1_scaffold_42_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38701..39999
DNA (1299bp) protein (433aa)
Beta-lactamase induction signal transducer n=8 Tax=Bacteroides RepID=Q64Z96_BACFR
putative transmembrane permease
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EXZ30393.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
Displaying items 1-30 of 100 in total

View Taxonomy