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L2_040_365G1_scaffold_248

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_248_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(135..1907)
DNA (1773bp) protein (591aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3B0_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG54183.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter
L2_040_365G1_scaffold_248_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(1916..2443)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FL09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02752.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_040_365G1_scaffold_248_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2702..2959
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EMS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59318.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L2_040_365G1_scaffold_248_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3069..3521
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J0L6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42516.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NUDIX hydrolase
L2_040_365G1_scaffold_248_5
unknown

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3582..3884
DNA (303bp) protein (101aa)

This feature has no annotations

L2_040_365G1_scaffold_248_6
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4259..4960
DNA (702bp) protein (234aa)
Transcriptional regulator n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T9F6_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:EKQ56508.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
gmuR; HTH-type transcriptional regulator GmuR
L2_040_365G1_scaffold_248_7
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5113..6456
DNA (1344bp) protein (448aa)
PTS system lactose/cellobiose-specific IIC component protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5T2_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
PTS system lactose/cellobiose family transporter subunit IIC
L2_040_365G1_scaffold_248_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6495..7925
DNA (1431bp) protein (477aa)
Glycosyl hydrolase, family 1 n=5 Tax=Erysipelotrichaceae RepID=B0N902_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ45537.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
beta-glucosidase
L2_040_365G1_scaffold_248_9
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7936..8229
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G5T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06588.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
L2_040_365G1_scaffold_248_10
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8249..8611
DNA (363bp) protein (121aa)
Putative cellobiose phosphotransferase system IIA component n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LUF1_9FIRM
Putative lichenan-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:ETO98833.1}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
licA; PTS system, cellobiose-specific enzyme II, A component
L2_040_365G1_scaffold_248_11
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8647..8937
DNA (291bp) protein (97aa)
Phosphotransferase system, lactose/cellobiose-specific IIB subunit n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LS05_CLOB8
phosphotransferase system, lactose/cellobiose-specific IIB subunit
Phosphotransferase system, lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:ABR33135.1}; Flags: Precursor;; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_040_365G1_scaffold_248_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9053..9559)
DNA (507bp) protein (169aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Superoxide dismutase [Cu-Zn] n=8 Tax=Clostridium clostridioforme RepID=G5I0P7_9CLOT
hypothetical protein
L2_040_365G1_scaffold_248_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(9584..10507)
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJF7_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCZ33077.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transcriptional regulator
L2_040_365G1_scaffold_248_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10704..12098
DNA (1395bp) protein (465aa)
Amino acid carrier protein n=2 Tax=Eubacterium RepID=C0ES99_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EEG37846.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
amino acid carrier protein
L2_040_365G1_scaffold_248_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12231..12731
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J3B3_9CLOT
L2_040_365G1_scaffold_248_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12728..13240
DNA (513bp) protein (171aa)
Dihydrofolate reductase n=3 Tax=Clostridium bolteae RepID=N9ZHB9_9CLOT
Dihydrofolate reductase {ECO:0000313|EMBL:ENZ39231.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
dihydrofolate reductase subunit
L2_040_365G1_scaffold_248_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13350..14261
DNA (912bp) protein (304aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=N9ZAP0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47221.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Galactose mutarotase and related enzymes
L2_040_365G1_scaffold_248_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14392..15282
DNA (891bp) protein (297aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.18.1.2 1.97.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ISY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43424.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_248_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15282..16670
DNA (1389bp) protein (463aa)
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.4.1.14 1.97.-.-)
Glutamate synthase n=9 Tax=Clostridium RepID=G5I0N9_9CLOT
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:ENZ09597.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_040_365G1_scaffold_248_20
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16880..17542
DNA (663bp) protein (221aa)
Transcriptional regulator, MerR family n=1 Tax=Blautia sp. KLE 1732 RepID=U2D567_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ERI91453.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
DNA invertase
L2_040_365G1_scaffold_248_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17672..19942)
DNA (2271bp) protein (757aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH34_9CLOT
L2_040_365G1_scaffold_248_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20048..21061
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41388.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC-type DNA-binding domain-containing proteins
L2_040_365G1_scaffold_248_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21136..22731
DNA (1596bp) protein (532aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX81_9CLOT
L2_040_365G1_scaffold_248_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23245..24918
DNA (1674bp) protein (558aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41383.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_248_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..25591
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41381.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
flavin reductase domain-containing FMN-binding protein
L2_040_365G1_scaffold_248_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25605..26240
DNA (636bp) protein (212aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM38_9CLOT
L2_040_365G1_scaffold_248_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26312..26623)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41377.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_248_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26616..29432)
DNA (2817bp) protein (939aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RP91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP17331.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_040_365G1_scaffold_248_29
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29681..30124
DNA (444bp) protein (148aa)
mRNA interferase n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JP48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64553.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
transcriptional regulator
L2_040_365G1_scaffold_248_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30470..32197
DNA (1728bp) protein (576aa)
Carbon starvation protein predicted membrane protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGU6_9CLOT
Carbon starvation protein predicted membrane protein {ECO:0000313|EMBL:CCY41373.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Carbon starvation protein, predicted membrane protein
Displaying items 1-30 of 56 in total

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