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L2_040_365G1_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_270_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(935..1309)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6A8_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L12P
L2_040_365G1_scaffold_270_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1412..1912)
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6P8_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L10P
L2_040_365G1_scaffold_270_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2239..2934)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQT8_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ribosomal protein L1, bacterial/chloroplast
L2_040_365G1_scaffold_270_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3002..3427)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=8 Tax=Clostridium RepID=A8S467_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
LSU ribosomal protein L11P
L2_040_365G1_scaffold_270_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3508..4023)
DNA (516bp) protein (172aa)
Transcription termination/antitermination protein NusG n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR28_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NusG antitermination factor
L2_040_365G1_scaffold_270_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4045..4296)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44551.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Preprotein translocase subunit SecE
L2_040_365G1_scaffold_270_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4323..4505)
DNA (183bp) protein (61aa)
50S ribosomal protein L33 n=1 Tax=Lachnospiraceae bacterium A2 RepID=UPI0003B48FEA
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_270_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4648..5364)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44552.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phosphoribosyltransferase
L2_040_365G1_scaffold_270_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5425..7710)
DNA (2286bp) protein (762aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
RecD/TraA family helicase (EC:3.1.11.5)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8S472_9CLOT
L2_040_365G1_scaffold_270_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7900..8952)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44556.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
rod shape-determining protein MreB
L2_040_365G1_scaffold_270_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9451..10302
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQU6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44558.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Site-specific recombinase XerD
L2_040_365G1_scaffold_270_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10321..11205
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44559.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
integrase family protein
L2_040_365G1_scaffold_270_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11377..12441
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41471.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted membrane protein
L2_040_365G1_scaffold_270_14
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12634..13812
DNA (1179bp) protein (393aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YZG2_9FIRM
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:CDA29879.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
transposase IS204/IS1001/IS1096/IS1165 family protein
L2_040_365G1_scaffold_270_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14326..16062)
DNA (1737bp) protein (579aa)
alpha-phosphoglucomutase (EC:5.4.2.8 5.4.2.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41472.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_270_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16258..18123)
DNA (1866bp) protein (622aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMF5_9CLOT
transcription termination factor Rho
L2_040_365G1_scaffold_270_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18293..19609)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41476.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L2_040_365G1_scaffold_270_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19802..20497)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41477.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
polysaccharide deacetylase
L2_040_365G1_scaffold_270_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20682..22616)
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41479.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycoside hydrolase
L2_040_365G1_scaffold_270_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22726..23760)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41480.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cell wall binding repeat-containing protein
L2_040_365G1_scaffold_270_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23978..25861)
DNA (1884bp) protein (628aa)
Bifunctional choline-phosphate cytidylyltransferase/choline kinase n=3 Tax=Clostridium RepID=N9YUS6_9CLOT
Bifunctional choline-phosphate cytidylyltransferase/choline kinase {ECO:0000313|EMBL:ENZ11522.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
choline/ethanolamine kinase
L2_040_365G1_scaffold_270_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26041..28197)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41482.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glutamine synthetase
L2_040_365G1_scaffold_270_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28433..29296)
DNA (864bp) protein (288aa)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Clostridium sp. CAG:7 RepID=R5IH73_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCY41483.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
fructose-1,6-bisphosphate aldolase, class II
L2_040_365G1_scaffold_270_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29439..30935)
DNA (1497bp) protein (499aa)
threonine synthase (EC:4.2.3.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41491.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_270_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31200..32009
DNA (810bp) protein (270aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXV7_9CLOT
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sugar fermentation stimulation protein
L2_040_365G1_scaffold_270_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32037..32267
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41518.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_270_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32319..33575)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41522.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
uracil-xanthine permease
L2_040_365G1_scaffold_270_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33632..35620)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHL4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41525.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative ATP dependent RNA helicase
L2_040_365G1_scaffold_270_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35772..36167)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41528.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_270_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36580..37656
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IMN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41529.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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