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L2_040_365G1_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_271_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIL5_9CLOT
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sporulation transcriptional activator Spo0A
L2_040_365G1_scaffold_271_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(432..1709)
DNA (1278bp) protein (426aa)
stage IV sporulation protein B (EC:3.4.21.116)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40138.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_271_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1920..3578)
DNA (1659bp) protein (553aa)
DNA repair protein RecN n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITU0_9CLOT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA repair protein RecN
L2_040_365G1_scaffold_271_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3634..4086)
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIK8_9CLOT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcriptional regulator, ArgR family
L2_040_365G1_scaffold_271_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4137..4976)
DNA (840bp) protein (280aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDI7_9CLOT
ATP-NAD/AcoX kinase
L2_040_365G1_scaffold_271_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4996..5820)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40118.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hemolysin TlyA family protein
L2_040_365G1_scaffold_271_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5863..7725)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDE2_9CLOT
deoxyxylulose-5-phosphate synthase
L2_040_365G1_scaffold_271_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7920..8831)
DNA (912bp) protein (304aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40111.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_271_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8824..9054)
DNA (231bp) protein (77aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDD8_9CLOT
Exonuclease VII small subunit
L2_040_365G1_scaffold_271_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9118..10422)
DNA (1305bp) protein (435aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITR7_9CLOT
L2_040_365G1_scaffold_271_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10426..11001)
DNA (576bp) protein (192aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITR1_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NusB antitermination factor
L2_040_365G1_scaffold_271_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11149..11529)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5III1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40094.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11618..12445)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40093.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12462..13052)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40088.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13015..13788)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40081.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sporulation stage III protein AF
L2_040_365G1_scaffold_271_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13797..14864)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40076.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Sporulation stage III protein AE
L2_040_365G1_scaffold_271_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14932..15318)
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDA9_9CLOT
Stage III sporulation protein AD {ECO:0000313|EMBL:CCY40073.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
stage III sporulation protein AD
L2_040_365G1_scaffold_271_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15389..15583)
DNA (195bp) protein (65aa)
Uncharacterized protein n=19 Tax=Clostridiales RepID=A8RS31_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:ENZ14392.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
stage III sporulation protein AC
L2_040_365G1_scaffold_271_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15596..16126)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40065.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sporulation stage III protein AB
L2_040_365G1_scaffold_271_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16183..17181)
DNA (999bp) protein (333aa)
Stage III sporulation protein AA n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITE3_9CLOT
Stage III sporulation protein AA {ECO:0000313|EMBL:CCY40057.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
stage III sporulation protein AA
L2_040_365G1_scaffold_271_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17514..17993)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDD7_9CLOT
conserved hypothetical protein TIGR00246
L2_040_365G1_scaffold_271_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18018..18722)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40051.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_040_365G1_scaffold_271_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18791..19465)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITL8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40046.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
competence protein ComEA helix-hairpin-helix repeat region
L2_040_365G1_scaffold_271_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19521..19955)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40042.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20391..21131
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ID84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40038.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21176..21604
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40037.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
C_GCAxxG_C_C family probable redox protein
L2_040_365G1_scaffold_271_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21674..22249)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IIC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40034.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_271_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22543..22740
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40025.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cold-shock protein
L2_040_365G1_scaffold_271_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22919..23800)
DNA (882bp) protein (294aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITB4_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Hsp33 protein
L2_040_365G1_scaffold_271_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23857..24666)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ID98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40010.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Methyltransferase domain.
Displaying items 1-30 of 84 in total

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