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L2_040_365G1_scaffold_303

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_303_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..147
DNA (147bp) protein (49aa)
Putative iron-only hydrogenase system regulator n=1 Tax=Clostridium sp. CAG:91 RepID=R6VPX0_9CLOT
Putative iron-only hydrogenase system regulator {ECO:0000313|EMBL:CDC99065.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
FeFe hydrogenase system regulator
L2_040_365G1_scaffold_303_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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240..1589
DNA (1350bp) protein (450aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
tig; trigger factor Tig (EC:5.2.1.8)
Trigger factor n=1 Tax=Clostridium sp. CAG:91 RepID=R6VXB5_9CLOT
L2_040_365G1_scaffold_303_3
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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1758..2345
DNA (588bp) protein (196aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Firmicutes RepID=R6EPV6_9FIRM
L2_040_365G1_scaffold_303_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2364..3626
DNA (1263bp) protein (421aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:91 RepID=R6WY95_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
clpX2; ATP-dependent Clp protease ATP-binding subunit ClpX
L2_040_365G1_scaffold_303_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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3720..4325
DNA (606bp) protein (202aa)
Probable GTP-binding protein EngB n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FAW8_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ribosome biogenesis GTP-binding protein YsxC
L2_040_365G1_scaffold_303_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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4381..5664
DNA (1284bp) protein (428aa)
Sporulation integral membrane protein YtvI n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQW5_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:CDA99216.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sporulation integral membrane protein YtvI
L2_040_365G1_scaffold_303_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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5661..6401
DNA (741bp) protein (247aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EH51_9FIRM
tRNA pseudouridine synthase A
L2_040_365G1_scaffold_303_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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6739..7437
DNA (699bp) protein (233aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EH44_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDA99210.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_040_365G1_scaffold_303_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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7580..8410
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EPU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99209.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_040_365G1_scaffold_303_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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8429..9301
DNA (873bp) protein (291aa)
Sodium extrusion ABC transporter ATP-binding protein NatA n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EQV7_9FIRM
Sodium extrusion ABC transporter ATP-binding protein NatA {ECO:0000313|EMBL:CDA99206.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type multidrug transport system, ATPase component
L2_040_365G1_scaffold_303_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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9291..10472
DNA (1182bp) protein (394aa)
ABC-2 type transporter n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EH41_9FIRM
ABC-2 type transporter {ECO:0000313|EMBL:CDA99205.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-2 type transporter.
L2_040_365G1_scaffold_303_12

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10599..12869
DNA (2271bp) protein (757aa)
Transcriptional regulator, AraC family n=1 Tax=human gut metagenome RepID=K1V762_9ZZZZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKC79751.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
AraC family transcriptional regulator
L2_040_365G1_scaffold_303_13

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13067..14791
DNA (1725bp) protein (575aa)
Extracellular solute-binding protein family 1 (Fragment) n=1 Tax=human gut metagenome RepID=K1T868_9ZZZZ
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EKC55506.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
family 1 extracellular solute-binding protein
L2_040_365G1_scaffold_303_14
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14872..15819
DNA (948bp) protein (316aa)
ABC transporter permease subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNL1_CLOSH
yteP3; putative multiple-sugar transport system permease YteP
Putative multiple-sugar transport system permease YteP {ECO:0000313|EMBL:AGC68051.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_040_365G1_scaffold_303_15
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15833..16720
DNA (888bp) protein (296aa)
ABC transporter periplasmic subunit-2 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMT2_CLOSH
lplC7; protein LplC
Protein LplC {ECO:0000313|EMBL:AGC68052.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L2_040_365G1_scaffold_303_16
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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16732..18825
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKY3_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01896.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
L2_040_365G1_scaffold_303_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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18890..20032
DNA (1143bp) protein (381aa)
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties and related proteins n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EC86_9FIRM
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties and related proteins {ECO:0000313|EMBL:CDA98138.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
L2_040_365G1_scaffold_303_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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20033..21367
DNA (1335bp) protein (445aa)
RNA methyltransferase TrmA family n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F7V6_9FIRM
RNA methyltransferase TrmA family {ECO:0000313|EMBL:CDA98137.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
TrmA family RNA methyltransferase
L2_040_365G1_scaffold_303_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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21539..22273
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FU99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00932.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_040_365G1_scaffold_303_20
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22343..22951
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93916.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_040_365G1_scaffold_303_21
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22941..23318
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93917.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_040_365G1_scaffold_303_22
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23293..24381
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FUA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93917.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L2_040_365G1_scaffold_303_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24457..24759
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FUA2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14474.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_303_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24753..25499
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00940.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_040_365G1_scaffold_303_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25512..26486
DNA (975bp) protein (325aa)
D12 class n6 adenine-specific DNA methyltransferase (EC:2.1.1.-)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB98_9FIRM
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EEV00941.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_040_365G1_scaffold_303_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26509..26958
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C0FUA6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14479.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_303_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26939..27226
DNA (288bp) protein (96aa)
SpoVT / AbrB like domain n=3 Tax=root RepID=D4KU10_9FIRM
SpoVT / AbrB like domain.
SpoVT / AbrB like domain {ECO:0000313|EMBL:CBL14480.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_303_28

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27220..27474
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SF25_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59377.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L2_040_365G1_scaffold_303_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27471..27998
DNA (528bp) protein (176aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KU11_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL14481.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_303_30

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28013..28426
DNA (414bp) protein (138aa)
SpoVG family protein n=2 Tax=root RepID=K1T9R5_9ZZZZ
SpoVG family protein {ECO:0000313|EMBL:EKC69932.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Uncharacterized protein, involved in the regulation of septum location
Displaying items 1-30 of 58 in total

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