ggKbase home page

L2_040_365G1_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_306_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3..350)
DNA (348bp) protein (116aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B3E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85136.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_040_365G1_scaffold_306_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

910..1590
DNA (681bp) protein (227aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B3E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85137.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Putative peptidoglycan-binding domain-containing protein
L2_040_365G1_scaffold_306_3
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2229..2363)
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LQ99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85138.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L2_040_365G1_scaffold_306_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2428..3222)
DNA (795bp) protein (265aa)
Transcriptional regulator, MerR family n=4 Tax=Firmicutes RepID=E4LQA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC85139.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
MerR family transcriptional regulator
L2_040_365G1_scaffold_306_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3297..4229)
DNA (933bp) protein (311aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=3 Tax=Erysipelotrichaceae RepID=H1B3E6_9FIRM
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L2_040_365G1_scaffold_306_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4325..5380)
DNA (1056bp) protein (352aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFR38972.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFR38972.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
4-phosphoerythronate dehydrogenase n=5 Tax=Firmicutes RepID=E4LQA2_9CLOT
Lactate dehydrogenase and related dehydrogenases
L2_040_365G1_scaffold_306_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5417..6472
DNA (1056bp) protein (352aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LQA3_9CLOT
TIGR00374 family protein {ECO:0000313|EMBL:EQJ53205.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
membrane protein
L2_040_365G1_scaffold_306_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6836..8110)
DNA (1275bp) protein (425aa)
UPF0597 protein HMPREF9406_2181 n=3 Tax=Firmicutes RepID=E4LQA4_9CLOT
UPF0597 protein HMPREF9406_2181 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_306_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8233..9105
DNA (873bp) protein (291aa)
LysR substrate binding domain protein n=7 Tax=Firmicutes RepID=E4LQA5_9CLOT
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQJ53202.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
LysR family transcriptional regulator
L2_040_365G1_scaffold_306_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9222..10193)
DNA (972bp) protein (324aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=5 Tax=Firmicutes RepID=E4LQA6_9CLOT
Phosphate acetyl/butaryl transferase family protein {ECO:0000313|EMBL:EQJ53201.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_306_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10376..10726
DNA (351bp) protein (117aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LQA7_9CLOT
DsrE/DsrF-like family protein {ECO:0000313|EMBL:EQJ53200.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dsrE/DsrF-like family protein
L2_040_365G1_scaffold_306_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10807..11481
DNA (675bp) protein (225aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LQA8_9CLOT
Phosphatidic acid phosphatase {ECO:0000313|EMBL:KGJ55065.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
PAP2 superfamily.
L2_040_365G1_scaffold_306_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11554..12441)
DNA (888bp) protein (296aa)
Fructose-bisphosphate aldolase class 1 {ECO:0000313|EMBL:EQJ53198.1}; EC=4.1.2.13 {ECO:0000313|EMBL:EQJ53198.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Fructose-1,6-bisphosphate aldolase n=5 Tax=Firmicutes RepID=E4LQA9_9CLOT
hypothetical protein
L2_040_365G1_scaffold_306_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12642..13382)
DNA (741bp) protein (247aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
act2; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=5 Tax=Firmicutes RepID=E4LQB0_9CLOT
L2_040_365G1_scaffold_306_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13444..15699)
DNA (2256bp) protein (752aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VW78_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:KGJ55068.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L2_040_365G1_scaffold_306_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16364..17185)
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=G1VW77_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84496.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
oxidoreductase
L2_040_365G1_scaffold_306_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17356..18123)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B3F8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC82707.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
purine or other phosphorylase family 1
L2_040_365G1_scaffold_306_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18136..19353)
DNA (1218bp) protein (406aa)
Transporter, major facilitator family protein n=5 Tax=Firmicutes RepID=E4LQB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC82704.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
major facilitator superfamily protein
L2_040_365G1_scaffold_306_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19594..20784
DNA (1191bp) protein (397aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LQB5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84493.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Putative transcriptional regulator
L2_040_365G1_scaffold_306_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

20771..21523
DNA (753bp) protein (251aa)
ABC transporter, ATP-binding protein n=7 Tax=Firmicutes RepID=E4LQB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84492.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_040_365G1_scaffold_306_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21510..22277
DNA (768bp) protein (256aa)
ABC transporter, permease protein n=4 Tax=Firmicutes RepID=E4LQB7_9CLOT
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQJ53189.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_040_365G1_scaffold_306_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22274..23281
DNA (1008bp) protein (336aa)
NMT1/THI5-like protein n=5 Tax=Firmicutes RepID=E4LQB8_9CLOT
NMT1-like family protein {ECO:0000313|EMBL:EQJ53188.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_040_365G1_scaffold_306_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23278..24027
DNA (750bp) protein (250aa)
ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LQB9_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFR39004.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_040_365G1_scaffold_306_24
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24213..27431)
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Carbamoyl-phosphate synthase large chain n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VW69_9FIRM
carB; carbamoyl phosphate synthase large subunit
L2_040_365G1_scaffold_306_25
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27434..28522)
DNA (1089bp) protein (363aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
Carbamoyl-phosphate synthase small chain n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VW68_9FIRM
carbamoyl-phosphate synthase small subunit
L2_040_365G1_scaffold_306_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28765..29403)
DNA (639bp) protein (213aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
pyrE; Orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VW67_9FIRM
L2_040_365G1_scaffold_306_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29404..30105)
DNA (702bp) protein (234aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=5 Tax=Firmicutes RepID=E4LQC3_9CLOT
L2_040_365G1_scaffold_306_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30105..31013)
DNA (909bp) protein (303aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=2 Tax=Firmicutes RepID=H1B9U0_9FIRM
L2_040_365G1_scaffold_306_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31013..31759)
DNA (747bp) protein (249aa)
Dihydroorotate dehydrogenase, electron transfer subunit {ECO:0000313|EMBL:EFR39035.1}; EC=1.3.5.2 {ECO:0000313|EMBL:EFR39035.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Dihydroorotate dehydrogenase, electron transfer subunit n=2 Tax=Firmicutes RepID=E4LQC5_9CLOT
dihydroorotate dehydrogenase electron transfer subunit
L2_040_365G1_scaffold_306_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31761..34976)
DNA (3216bp) protein (1072aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Carbamoyl-phosphate synthase large chain n=4 Tax=Firmicutes RepID=E4LQC6_9CLOT
carB; carbamoyl phosphate synthase large subunit
Displaying items 1-30 of 48 in total

View Taxonomy