ggKbase home page

L2_040_365G1_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_366_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

464..844
DNA (381bp) protein (127aa)
HTH-type transcriptional regulator AdhR n=3 Tax=Clostridiales RepID=G9YRX3_9FIRM
HTH-type transcriptional regulator AdhR {ECO:0000313|EMBL:ERI75776.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative transcriptional regulator
L2_040_365G1_scaffold_366_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1018..2880
DNA (1863bp) protein (621aa)
Ser/Thr phosphatase family protein n=2 Tax=Clostridiales RepID=G9YRX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30952.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative surface layer protein
L2_040_365G1_scaffold_366_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2966..4102
DNA (1137bp) protein (379aa)
YibE/F-like protein n=3 Tax=Clostridiales RepID=G9YRX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30953.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_366_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4159..4281
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YRX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30954.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L2_040_365G1_scaffold_366_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4316..6190)
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55666.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
fenI protein
L2_040_365G1_scaffold_366_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6257..8035)
DNA (1779bp) protein (593aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YRX8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM47993.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC transporter ATP-binding protein
L2_040_365G1_scaffold_366_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8418..9062
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRX9_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_040_365G1_scaffold_366_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9071..9751
DNA (681bp) protein (227aa)
Transcriptional regulatory protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRY0_9FIRM
Transcriptional regulatory protein {ECO:0000313|EMBL:EHM47995.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
two component transcriptional regulator, winged helix family
L2_040_365G1_scaffold_366_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9846..10499
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30959.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
beta-lactamase domain-containing protein
L2_040_365G1_scaffold_366_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10778..11176
DNA (399bp) protein (133aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YRY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30960.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GntR family transcriptional regulator
L2_040_365G1_scaffold_366_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11173..12003
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55672.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_040_365G1_scaffold_366_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11993..12526
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55673.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_040_365G1_scaffold_366_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12519..13262
DNA (744bp) protein (248aa)
ABC transporter, ATP-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YRY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55674.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L2_040_365G1_scaffold_366_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13265..14689
DNA (1425bp) protein (475aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YRY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55675.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_040_365G1_scaffold_366_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15030..16721
DNA (1692bp) protein (564aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
2-isopropylmalate synthase, yeast type (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D893_9CLOT
L2_040_365G1_scaffold_366_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16798..17280
DNA (483bp) protein (161aa)
Transcriptional regulator, MarR family n=3 Tax=Clostridiales RepID=G9YRY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30966.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Transcriptional regulators
L2_040_365G1_scaffold_366_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17478..18857
DNA (1380bp) protein (460aa)
Putative ATP synthase F0, A subunit n=3 Tax=Clostridiales RepID=G9YRZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30967.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Na+/H+ antiporter
L2_040_365G1_scaffold_366_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18847..20055
DNA (1209bp) protein (403aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Aminotransferase, class I/II n=3 Tax=Clostridiales RepID=G9YRZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55679.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_040_365G1_scaffold_366_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20116..21339)
DNA (1224bp) protein (408aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase n=3 Tax=Clostridiales RepID=G9YN00_9FIRM
L2_040_365G1_scaffold_366_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21416..22624)
DNA (1209bp) protein (403aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQS2_9CLOT
L2_040_365G1_scaffold_366_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22649..23089)
DNA (441bp) protein (147aa)
ACT domain protein n=3 Tax=Clostridiales RepID=G9YMZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30971.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_366_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23273..24349
DNA (1077bp) protein (359aa)
Sporulation integral membrane protein YtvI n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHB4_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EHO30972.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ytvI; YtvI
L2_040_365G1_scaffold_366_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24390..27095)
DNA (2706bp) protein (902aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53097.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative penicillin-binding protein
L2_040_365G1_scaffold_366_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27309..27635
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YMZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30974.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_366_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28007..29605
DNA (1599bp) protein (533aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
PPIC-type PPIASE domain protein n=2 Tax=Clostridiales RepID=U2AQS6_9CLOT
putative isomerase
L2_040_365G1_scaffold_366_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29673..30389
DNA (717bp) protein (239aa)
ThiF family protein n=3 Tax=Clostridiales RepID=G9YMZ2_9FIRM
ThiF family protein {ECO:0000313|EMBL:EHM53741.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_040_365G1_scaffold_366_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30435..30803
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30977.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_366_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30803..31159
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI62478.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_366_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31442..31867)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=G9YMY8_9FIRM
putative Holliday junction resolvase
L2_040_365G1_scaffold_366_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32188..32352
DNA (165bp) protein (55aa)
Ribosomal protein L33 n=3 Tax=Clostridiales RepID=U2BZN8_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
rpmG; 50S ribosomal protein L33
Displaying items 1-30 of 43 in total

View Taxonomy