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L2_040_365G1_scaffold_382

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_382_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..345)
DNA (345bp) protein (115aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Clostridiales RepID=B0P233_9CLOT
hypothetical protein
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDS21359.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_040_365G1_scaffold_382_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(810..2141)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QSM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK41752.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Predicted ATPase (AAA+ superfamily)
L2_040_365G1_scaffold_382_3
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2519..4093)
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80540.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_040_365G1_scaffold_382_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4071..5846)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80538.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_382_5
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5923..6771)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CRG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80536.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
beta-lactamase domain-containing protein
L2_040_365G1_scaffold_382_6
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6792..7622)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CQK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80534.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
sugar ABC transporter permease
L2_040_365G1_scaffold_382_7
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7624..8508)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80533.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
binding-protein-dependent transport systems inner membrane component
L2_040_365G1_scaffold_382_8
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8596..9855)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CSA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD80532.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ABC-type sugar transport system, periplasmic component
L2_040_365G1_scaffold_382_9
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10067..11116)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70833.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_040_365G1_scaffold_382_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11274..11621)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46847.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
hypothetical protein
L2_040_365G1_scaffold_382_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11960..12844
DNA (885bp) protein (295aa)
Aldose 1-epimerase n=2 Tax=Roseburia RepID=C0FW75_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:EEG93239.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
aldose 1-epimerase
L2_040_365G1_scaffold_382_12
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12849..13463)
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FW73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93237.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
uridine kinase
L2_040_365G1_scaffold_382_13
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13454..13993)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30233.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L2_040_365G1_scaffold_382_14
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14130..15617)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG93465.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Uncharacterized conserved protein (DUF2088).
L2_040_365G1_scaffold_382_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15644..16582)
DNA (939bp) protein (313aa)
Triosephosphate isomerase (EC:5.3.1.1)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5I0C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30216.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L2_040_365G1_scaffold_382_16
Catellicoccus marimammalium, Catellicoccus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16579..17349)
DNA (771bp) protein (257aa)
Transport protein n=1 Tax=Catellicoccus marimammalium M35/04/3 RepID=K8Z7E5_9ENTE
Transport protein {ECO:0000313|EMBL:EKU26934.1}; TaxID=1234409 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Catellicoccus.;" source="Catellicoccus marimammalium M35/04/3.;"
hypothetical protein
L2_040_365G1_scaffold_382_17
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17315..18469)
DNA (1155bp) protein (385aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:CBK80128.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBK80128.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Fructose-bisphosphate aldolase n=1 Tax=Coprococcus catus GD/7 RepID=D4J707_9FIRM
L2_040_365G1_scaffold_382_18
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18482..19630)
DNA (1149bp) protein (383aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBT9_BLAHA
L2_040_365G1_scaffold_382_19
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(19667..20488)
DNA (822bp) protein (274aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6REA3_9FIRM
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
L2_040_365G1_scaffold_382_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20615..21571)
DNA (957bp) protein (319aa)
UPF0272 protein BN806_01385 n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFT4_9FIRM
UPF0272 protein BN806_01385 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
conserved hypothetical protein TIGR00299
L2_040_365G1_scaffold_382_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21753..22811
DNA (1059bp) protein (353aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6PII0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC09557.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Transcriptional regulators
L2_040_365G1_scaffold_382_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22927..23988)
DNA (1062bp) protein (354aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
SIS domain protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AAW2_9CLOT
SIS domain protein {ECO:0000313|EMBL:EFD01043.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L2_040_365G1_scaffold_382_23
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24049..24900)
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolase (EC:4.1.2.40)
Ketose-bisphosphate aldolase n=2 Tax=Clostridium RepID=D3AAW1_9CLOT
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CCZ61613.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L2_040_365G1_scaffold_382_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24953..25978)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IA09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61898.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LacI family transcriptional regulator
L2_040_365G1_scaffold_382_25
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26076..27089)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HKW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30228.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
L2_040_365G1_scaffold_382_26
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27183..27974)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76303.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_040_365G1_scaffold_382_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27953..28735)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97890.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_040_365G1_scaffold_382_28
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28790..29956)
DNA (1167bp) protein (389aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
6-phosphofructokinase n=1 Tax=Coprococcus catus GD/7 RepID=D4J6Z6_9FIRM
L2_040_365G1_scaffold_382_29
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30352..30921)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32223.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Chromate transport protein ChrA
L2_040_365G1_scaffold_382_30
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30918..31493)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I5D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY32222.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Chromate transport protein ChrA
Displaying items 1-30 of 62 in total

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