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L2_040_365G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_397_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(117..1856)
DNA (1740bp) protein (580aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19080.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC transporter
L2_040_365G1_scaffold_397_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1857..2342)
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RHV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19081.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
MarR family transcriptional regulator
L2_040_365G1_scaffold_397_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2626..3030
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19083.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_040_365G1_scaffold_397_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3171..3794)
DNA (624bp) protein (208aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19084.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
NADPH-dependent FMN reductase
L2_040_365G1_scaffold_397_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3798..6950)
DNA (3153bp) protein (1051aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19085.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
SNF2-like protein
L2_040_365G1_scaffold_397_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7034..8821)
DNA (1788bp) protein (596aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=3 Tax=Clostridium bolteae RepID=A8RHW2_9CLOT
L2_040_365G1_scaffold_397_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8944..9501)
DNA (558bp) protein (186aa)
Elongation factor P n=7 Tax=Clostridium RepID=A8RHW3_9CLOT
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
translation elongation factor P (EF-P)
L2_040_365G1_scaffold_397_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9634..11043)
DNA (1410bp) protein (470aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00228653}; EC=1.1.1.- {ECO:0000256|SAAS:SAAS00275099};; EC=1.1.1.25 {ECO:0000256|SAAS:SAAS00216361};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
shikimate dehydrogenase (EC:1.1.1.25)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHW4_9CLOT
L2_040_365G1_scaffold_397_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11053..11571)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19089.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
L2_040_365G1_scaffold_397_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11608..12060)
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=4 Tax=Clostridium bolteae RepID=A8RHW7_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
ATP-cone domain-containing protein
L2_040_365G1_scaffold_397_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12243..13001
DNA (759bp) protein (253aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=3 Tax=Clostridium bolteae RepID=A8RHW9_9CLOT
L2_040_365G1_scaffold_397_12
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13235..13495)
DNA (261bp) protein (87aa)
YlmC/YmxH family sporulation protein n=17 Tax=Clostridium RepID=N9X0V5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98076.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
YlmC/YmxH family sporulation protein
L2_040_365G1_scaffold_397_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13649..14449)
DNA (801bp) protein (267aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19096.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_040_365G1_scaffold_397_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14646..15569)
DNA (924bp) protein (308aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19098.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
NLPA lipoprotein
L2_040_365G1_scaffold_397_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15824..16489)
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RHX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19099.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
binding-protein-dependent transport system inner membrane protein
L2_040_365G1_scaffold_397_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16491..17507)
DNA (1017bp) protein (339aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHX9_9CLOT
ABC transporter
L2_040_365G1_scaffold_397_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17715..17807)
DNA (93bp) protein (31aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9YHS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98071.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L2_040_365G1_scaffold_397_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17932..19077)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=R0C217_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33962.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_040_365G1_scaffold_397_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19134..20537)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19102.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
dipeptidase
L2_040_365G1_scaffold_397_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20679..21125)
DNA (447bp) protein (149aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RHY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33964.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L2_040_365G1_scaffold_397_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21385..22989)
DNA (1605bp) protein (535aa)
Peptide chain release factor 3 n=3 Tax=Clostridium bolteae RepID=N9Z2P8_9CLOT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
peptide chain release factor 3
L2_040_365G1_scaffold_397_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23288..24517
DNA (1230bp) protein (410aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19107.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L2_040_365G1_scaffold_397_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24647..25564)
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19109.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
periplasmic binding protein/LacI transcriptional regulator
L2_040_365G1_scaffold_397_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25633..26574)
DNA (942bp) protein (314aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RHZ1_9CLOT
Ribose ABC transporter permease {ECO:0000313|EMBL:ENZ11867.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ribose ABC transporter permease
L2_040_365G1_scaffold_397_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26571..28064)
DNA (1494bp) protein (498aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHZ2_9CLOT
monosaccharide-transporting ATPase
L2_040_365G1_scaffold_397_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28092..28508)
DNA (417bp) protein (139aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
D-ribose pyranase n=3 Tax=Clostridium bolteae RepID=A8RHZ4_9CLOT
D-ribose pyranase
L2_040_365G1_scaffold_397_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28558..29451)
DNA (894bp) protein (298aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19113.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribokinase
L2_040_365G1_scaffold_397_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29545..30522)
DNA (978bp) protein (326aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RHZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19114.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
rbsR; ribose operon repressor
L2_040_365G1_scaffold_397_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30919..32133)
DNA (1215bp) protein (405aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:6.3.2.5)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RI00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP19117.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_040_365G1_scaffold_397_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32226..32999
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Type III pantothenate kinase n=8 Tax=Clostridium RepID=A8RI01_9CLOT
transcriptional activator, Baf family
Displaying items 1-30 of 43 in total

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