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L2_040_365G1_scaffold_401

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_401_1
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98..844)
DNA (747bp) protein (249aa)
Glutamine ABC transporter, ATP-binding protein GlnQ {ECO:0000313|EMBL:EEQ57717.1}; EC=3.6.3.- {ECO:0000313|EMBL:EEQ57717.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glutamine ABC transporter, ATP-binding protein GlnQ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHN2_9FIRM
ABC transporter
L2_040_365G1_scaffold_401_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(844..1641)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42954.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
polar amino acid ABC transporter inner membrane subunit
L2_040_365G1_scaffold_401_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1690..2595)
DNA (906bp) protein (302aa)
Amino acid ABC transporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILD9_9CLOT
Amino acid ABC transporter {ECO:0000313|EMBL:CCY42953.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
family 3 extracellular solute-binding protein
L2_040_365G1_scaffold_401_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2900..3796)
DNA (897bp) protein (299aa)
SrtB family sortase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z8U0_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENZ16497.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
sortase
L2_040_365G1_scaffold_401_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3833..4711)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42950.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_401_6
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4897..6123
DNA (1227bp) protein (409aa)
SARP family transcriptional regulator n=3 Tax=Clostridium RepID=N9ZHM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01124.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
SARP family transcriptional regulator
L2_040_365G1_scaffold_401_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6217..7638)
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42934.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_040_365G1_scaffold_401_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7858..8595)
DNA (738bp) protein (246aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILB6_9CLOT
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family
L2_040_365G1_scaffold_401_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8760..9551)
DNA (792bp) protein (264aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RQY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01129.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
phosphomethylpyrimidine kinase
L2_040_365G1_scaffold_401_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9819..12395)
DNA (2577bp) protein (859aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate phosphate dikinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1M5_9CLOT
Pyruvate phosphate dikinase {ECO:0000313|EMBL:CCY42931.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_401_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12798..13487)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42930.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
winged helix family two component transcriptional regulator
L2_040_365G1_scaffold_401_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13484..14989)
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILB2_9CLOT
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L2_040_365G1_scaffold_401_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(15242..16630)
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1W2_9CLOT
L2_040_365G1_scaffold_401_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16838..17494)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0B779_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ40834.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
L2_040_365G1_scaffold_401_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17617..18267)
DNA (651bp) protein (217aa)
DNA repair protein RecO n=2 Tax=Clostridium bolteae RepID=R0B5H3_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
DNA repair protein RecO
L2_040_365G1_scaffold_401_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18283..19194)
DNA (912bp) protein (304aa)
GTPase Era n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHT0_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
GTP-binding protein Era
L2_040_365G1_scaffold_401_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19224..22172)
DNA (2949bp) protein (983aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F7P6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00903.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Peptidase M16C associated domain-containing protein
L2_040_365G1_scaffold_401_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22268..23122)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42918.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_401_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23154..24380)
DNA (1227bp) protein (409aa)
Collagenase and related proteases (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1L1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42916.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_401_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24390..25043)
DNA (654bp) protein (218aa)
Putative O-methyltransferase {ECO:0000313|EMBL:KJJ72526.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJJ72526.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPU8_9CLOT
Predicted O-methyltransferase
L2_040_365G1_scaffold_401_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25046..25681)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42913.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aminodeoxychorismate lyase
L2_040_365G1_scaffold_401_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25730..27805)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1K6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42911.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA-metabolising metallo-beta-lactamase
L2_040_365G1_scaffold_401_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27822..28124)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42910.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_401_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28102..28572)
DNA (471bp) protein (157aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL91_9CLOT
conserved hypothetical protein TIGR00250
L2_040_365G1_scaffold_401_25
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28847..29107)
DNA (261bp) protein (87aa)
UPF0297 protein HMPREF9469_04615 n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPV3_9CLOT
UPF0297 protein CLFS41_23000 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_040_365G1_scaffold_401_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29217..30578)
DNA (1362bp) protein (454aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42905.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_401_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30747..30980
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42903.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS HPr component phosphorylation site.
L2_040_365G1_scaffold_401_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31032..32213)
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Probable tRNA sulfurtransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J1J6_9CLOT
thiamine biosynthesis/tRNA modification protein ThiI
L2_040_365G1_scaffold_401_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32303..33457)
DNA (1155bp) protein (385aa)
cysteine desulfurase (EC:2.8.1.7)
Aminotransferase, class V n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EHU3_9FIRM
Aminotransferase, class V {ECO:0000313|EMBL:EEQ57778.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L2_040_365G1_scaffold_401_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33471..34220)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:7 RepID=R5IL79_9CLOT
Displaying items 1-30 of 42 in total

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