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L2_040_365G1_scaffold_411

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_411_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
Putative uncharacterized protein (Fragment) n=3 Tax=Clostridiales RepID=H1C892_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57492.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Protein of unknown function DUF2088
L2_040_365G1_scaffold_411_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(146..1294)
DNA (1149bp) protein (383aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
3-dehydroquinate synthase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BWV2_9CLOT
3-dehydroquinate synthase {ECO:0000313|EMBL:ERI76695.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_411_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1309..2787)
DNA (1479bp) protein (493aa)
Membrane protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54050.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_040_365G1_scaffold_411_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2803..3279)
DNA (477bp) protein (159aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YMI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI76693.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_411_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3374..4354)
DNA (981bp) protein (327aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27194.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC transporter substrate-binding protein
L2_040_365G1_scaffold_411_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4402..5448)
DNA (1047bp) protein (349aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
uxuA; mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YMI5_9FIRM
L2_040_365G1_scaffold_411_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5445..6350)
DNA (906bp) protein (302aa)
Dihydrodipicolinate synthetase family protein n=2 Tax=Clostridiales RepID=G9YMI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54046.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dihydrodipicolinate synthetase
L2_040_365G1_scaffold_411_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6383..8074)
DNA (1692bp) protein (564aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BF02_9CLOT
L2_040_365G1_scaffold_411_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8071..8901)
DNA (831bp) protein (277aa)
Transcriptional regulator, IclR family protein n=3 Tax=Clostridiales RepID=G9YMI8_9FIRM
Transcriptional regulator, IclR family protein {ECO:0000313|EMBL:EHM54066.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
IclR family transcriptional regulator
L2_040_365G1_scaffold_411_10
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9369..10385
DNA (1017bp) protein (339aa)
Putative HTH-type transcriptional repressor CytR n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DB03_9CLOT
Putative HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:ERI76686.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
LacI family transcriptional regulator
L2_040_365G1_scaffold_411_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10422..11447
DNA (1026bp) protein (342aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27200.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
LacI family transcriptional regulator
L2_040_365G1_scaffold_411_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11526..13037
DNA (1512bp) protein (504aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CJJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54041.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC transporter
L2_040_365G1_scaffold_411_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13043..14092
DNA (1050bp) protein (350aa)
Putative ribose ABC transporter permease protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BY18_9CLOT
Putative ribose ABC transporter permease protein {ECO:0000313|EMBL:ERI76683.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type transporter, integral membrane subunit
L2_040_365G1_scaffold_411_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14114..15154
DNA (1041bp) protein (347aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Clostridiales RepID=U2D5A7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO27203.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
oxidoreductase domain containing protein
L2_040_365G1_scaffold_411_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15174..16088
DNA (915bp) protein (305aa)
AP endonuclease, family 2 n=3 Tax=Clostridiales RepID=G9YMJ6_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EHM54074.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
xylose isomerase domain-containing protein TIM barrel
L2_040_365G1_scaffold_411_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16139..16951
DNA (813bp) protein (271aa)
AP endonuclease, family 2 (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU24_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:ERI61335.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
AMP-dependent synthetase and ligase
L2_040_365G1_scaffold_411_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16962..17945
DNA (984bp) protein (328aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C1S1_9CLOT
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERI61336.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
oxidoreductase domain protein
L2_040_365G1_scaffold_411_18
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18208..18966)
DNA (759bp) protein (253aa)
FCD domain protein n=2 Tax=Clostridiales RepID=G9YU26_9FIRM
FCD domain protein {ECO:0000313|EMBL:ERI61338.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
GntR family transcriptional regulator
L2_040_365G1_scaffold_411_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19062..20501)
DNA (1440bp) protein (480aa)
succinate CoA transferase (EC:3.1.2.1)
Acetyl-CoA hydrolase/transferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU22_9FIRM
Acetyl-CoA hydrolase/transferase {ECO:0000313|EMBL:EHM43212.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_040_365G1_scaffold_411_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20610..21809)
DNA (1200bp) protein (400aa)
Acetyl-CoA C-acetyltransferase (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54032.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
acetyl-CoA acetyltransferase
L2_040_365G1_scaffold_411_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21832..23001)
DNA (1170bp) protein (390aa)
Malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38)
NAD-dependent malic enzyme n=2 Tax=Clostridiales RepID=U2C1S5_9CLOT
NAD-dependent malic enzyme {ECO:0000313|EMBL:ERI61341.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_411_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23032..24396)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
class II fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJK1_9FIRM
L2_040_365G1_scaffold_411_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24425..25015)
DNA (591bp) protein (197aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type n=3 Tax=Clostridiales RepID=G9YLK3_9FIRM
Hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:ERI61343.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_411_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25049..25933)
DNA (885bp) protein (295aa)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=2 Tax=Clostridiales RepID=G9YLK4_9FIRM
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type {ECO:0000313|EMBL:EHO27213.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
L2_040_365G1_scaffold_411_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26000..27430)
DNA (1431bp) protein (477aa)
MmgE/PrpD family protein n=2 Tax=Clostridiales RepID=U2AML7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54080.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
MmgE/PrpD family protein
L2_040_365G1_scaffold_411_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27759..28622
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YLK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27215.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_411_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28649..29848
DNA (1200bp) protein (400aa)
Putative hemolysin n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BWG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54078.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
class I and II aminotransferase
L2_040_365G1_scaffold_411_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29891..30739
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2APQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI61348.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_411_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30775..32649
DNA (1875bp) protein (625aa)
TRAP transporter, 4TM/12TM fusion protein n=3 Tax=Clostridiales RepID=G9YLK9_9FIRM
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EHO27218.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TRAP transporter, 4TM/12TM fusion protein
L2_040_365G1_scaffold_411_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32703..33701
DNA (999bp) protein (333aa)
TRAP transporter solute receptor, TAXI family n=2 Tax=Clostridiales RepID=G9YLL0_9FIRM
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ERI61354.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
TRAP transporter solute receptor TAXI family protein
Displaying items 1-30 of 37 in total

View Taxonomy