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L2_040_365G1_scaffold_422

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_422_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

325..1146
DNA (822bp) protein (274aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=G1VRT9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87506.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_040_365G1_scaffold_422_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1136..2185
DNA (1050bp) protein (350aa)
PTS system mannose/fructose/sorbose family IID component n=3 Tax=Firmicutes RepID=E4LYI1_9CLOT
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EFR36464.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system transporter subunit IID
L2_040_365G1_scaffold_422_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2370..3044
DNA (675bp) protein (225aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LYI2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ49431.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_422_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3233..3907)
DNA (675bp) protein (225aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LYI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36433.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_040_365G1_scaffold_422_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4029..5033)
DNA (1005bp) protein (335aa)
PTS system mannose/fructose/sorbose family IID component n=5 Tax=Firmicutes RepID=E4LYI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31201.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
PTS system transporter subunit IID
L2_040_365G1_scaffold_422_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5023..5844)
DNA (822bp) protein (274aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LYI5_9CLOT
PTS system sorbose-specific iic component {ECO:0000313|EMBL:EFR36203.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L2_040_365G1_scaffold_422_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5906..6382)
DNA (477bp) protein (159aa)
PTS system, mannose/fructose/sorbose family, IIB component {ECO:0000313|EMBL:EFR36468.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFR36468.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system, mannose/fructose/sorbose family, IIB component n=7 Tax=Firmicutes RepID=E4LYI6_9CLOT
agaB; PTS system N-acetylgalactosamine-specific IIB component
L2_040_365G1_scaffold_422_8
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6804..7976
DNA (1173bp) protein (391aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VRT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31198.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
AraC family transcriptional regulator
L2_040_365G1_scaffold_422_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7994..8251
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VRT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87842.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_422_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8389..8694)
DNA (306bp) protein (102aa)
Preprotein translocase, YajC subunit n=5 Tax=Firmicutes RepID=E4LYI9_9CLOT
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EQJ55144.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
preprotein translocase, YajC subunit
L2_040_365G1_scaffold_422_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8709..9137)
DNA (429bp) protein (143aa)
PTS system fructose IIA component n=7 Tax=Firmicutes RepID=E4LYJ0_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENY87844.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system mannose-specific component IIAB-like protein
L2_040_365G1_scaffold_422_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9155..10333)
DNA (1179bp) protein (393aa)
galactosamine 6-phosphate isomerase AgaS (EC:5.-.-.-)
Sugar isomerase, AgaS family n=7 Tax=Firmicutes RepID=E4LYJ1_9CLOT
Adhesin {ECO:0000313|EMBL:KGJ54758.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L2_040_365G1_scaffold_422_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10521..11087
DNA (567bp) protein (189aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LYJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36227.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_040_365G1_scaffold_422_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11334..12248)
DNA (915bp) protein (305aa)
Acetyltransferase, GNAT family n=5 Tax=Firmicutes RepID=E4LYJ4_9CLOT
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ55149.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_040_365G1_scaffold_422_15
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12252..12518)
DNA (267bp) protein (89aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LYJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87848.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_422_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12591..13145)
DNA (555bp) protein (185aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LYJ6_9CLOT
Putative thermonuclease {ECO:0000313|EMBL:EQJ55151.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_422_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13183..14121)
DNA (939bp) protein (313aa)
Putative sporulation transcription regulator WhiA n=7 Tax=Firmicutes RepID=E4LYJ7_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_040_365G1_scaffold_422_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14124..15071)
DNA (948bp) protein (316aa)
Putative gluconeogenesis factor n=3 Tax=Firmicutes RepID=H1B1J5_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_040_365G1_scaffold_422_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15076..15930)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein HMPREF0982_03314 n=3 Tax=Firmicutes RepID=H1B1J6_9FIRM
Nucleotide-binding protein BN746_01015 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ATP-binding protein
L2_040_365G1_scaffold_422_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16452..16883
DNA (432bp) protein (144aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=G1VRS0_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ55155.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
N-acetyltransferase GCN5
L2_040_365G1_scaffold_422_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16880..17797
DNA (918bp) protein (306aa)
Ribokinase {ECO:0000313|EMBL:EQJ55156.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EQJ55156.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ribokinase n=5 Tax=Firmicutes RepID=E4LYK1_9CLOT
ribokinase-like domain-containing protein
L2_040_365G1_scaffold_422_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17799..18719
DNA (921bp) protein (307aa)
Non-specific ribonucleoside hydrolase rihC {ECO:0000313|EMBL:EQJ55157.1}; EC=3.2.-.- {ECO:0000313|EMBL:EQJ55157.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Inosine-uridine preferring nucleoside hydrolase n=5 Tax=Firmicutes RepID=E4LYK2_9CLOT
ribonucleoside hydrolase RihC
L2_040_365G1_scaffold_422_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18749..20164
DNA (1416bp) protein (472aa)
Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family n=5 Tax=Firmicutes RepID=E4LYK3_9CLOT
Transporter, anaerobic C4-dicarboxylate uptake C family protein {ECO:0000313|EMBL:EQJ55158.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
anaerobic C4-dicarboxylate transporter
L2_040_365G1_scaffold_422_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20259..21266
DNA (1008bp) protein (336aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P28 RepID=T4NIP3_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ55159.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_422_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21355..23142)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B1K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31182.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_040_365G1_scaffold_422_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23551..23709)
DNA (159bp) protein (53aa)
Rubredoxin (EC:1.18.1.1)
Rubredoxin n=5 Tax=Firmicutes RepID=E4M001_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_040_365G1_scaffold_422_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23712..24632)
DNA (921bp) protein (307aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Thioredoxin reductase n=3 Tax=Erysipelotrichaceae RepID=H1B1K4_9FIRM
thioredoxin-disulfide reductase
L2_040_365G1_scaffold_422_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24611..26083)
DNA (1473bp) protein (491aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Prolipoprotein diacylglyceryl transferase n=5 Tax=Firmicutes RepID=E4M003_9CLOT
prolipoprotein diacylglyceryl transferase
L2_040_365G1_scaffold_422_29
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26093..27043)
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.11.- 2.7.4.- 2.7.1.-)
HPr kinase/phosphorylase n=7 Tax=Firmicutes RepID=E4M004_9CLOT
L2_040_365G1_scaffold_422_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27043..29865)
DNA (2823bp) protein (941aa)
UvrABC system protein A n=3 Tax=Firmicutes RepID=E4M005_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
uvrA; excinuclease ABC subunit A
Displaying items 1-30 of 37 in total

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