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L2_040_365G1_scaffold_436

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_436_1
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(351..2108)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N1C6_SLAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV21218.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L2_040_365G1_scaffold_436_2
Oribacterium sinus, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2095..2799)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Oribacterium sinus F0268 RepID=C2L087_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEJ50565.1}; TaxID=585501 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sinus F0268.;"
hypothetical protein
L2_040_365G1_scaffold_436_3
unknown

Not on your lists

comp(2890..3561)
DNA (672bp) protein (224aa)

This feature has no annotations

L2_040_365G1_scaffold_436_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3575..5458)
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88609.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_040_365G1_scaffold_436_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5668..7200)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JF39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES76386.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
HTH-type transcriptional regulator
L2_040_365G1_scaffold_436_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7506..9365)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQ51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44338.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized vancomycin resistance protein
L2_040_365G1_scaffold_436_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9578..10423
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44337.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PHP domain-containing protein
L2_040_365G1_scaffold_436_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10625..10861
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5M6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44336.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10919..12097)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF48_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40743.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Alanyl-tRNA synthetase, class IIc-like protein
L2_040_365G1_scaffold_436_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12608..12751)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40740.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_436_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12857..13285
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK89_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40739.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13333..13620
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40737.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13884..15254
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40729.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid carrier protein
L2_040_365G1_scaffold_436_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15332..16114)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40727.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16344..18758)
DNA (2415bp) protein (805aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF50_9CLOT
L2_040_365G1_scaffold_436_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19122..19469)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF28_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40723.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19588..20913
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVG6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40721.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
UvrD/REP helicase
L2_040_365G1_scaffold_436_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20899..22059)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK70_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40719.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_436_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22263..23171
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF26_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40718.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L2_040_365G1_scaffold_436_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23291..24289)
DNA (999bp) protein (333aa)
Isocitrate/isopropylmalate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase NAD-dependent n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF42_9CLOT
Isocitrate dehydrogenase NAD-dependent {ECO:0000313|EMBL:CCY40715.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_436_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24292..25632)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK66_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
citrate (Si)-synthase
L2_040_365G1_scaffold_436_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25686..27998)
DNA (2313bp) protein (771aa)
Aconitase A n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV97_9CLOT
Aconitase A {ECO:0000313|EMBL:CCY40712.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
aconitate hydratase
L2_040_365G1_scaffold_436_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28368..30461)
DNA (2094bp) protein (698aa)
translation elongation factor 2 (EF-2/EF-G) (EC:3.6.5.3)
Translation elongation factor G n=8 Tax=Clostridium RepID=N9WNR5_9CLOT
Translation elongation factor G {ECO:0000313|EMBL:ENZ13120.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L2_040_365G1_scaffold_436_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30768..33272
DNA (2505bp) protein (835aa)
Excinuclease ATPase subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV88_9CLOT
Excinuclease ATPase subunit {ECO:0000313|EMBL:CCY40702.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Excinuclease ATPase subunit
L2_040_365G1_scaffold_436_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33439..34461
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IVE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40701.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
phospho-2-dehydro-3-deoxyheptonate aldolase
L2_040_365G1_scaffold_436_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34719..35870
DNA (1152bp) protein (384aa)
prephenate dehydrogenase (EC:1.3.1.12)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IF32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40700.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_436_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35894..37168
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IK53_9CLOT
3-phosphoshikimate 1-carboxyvinyltransferase
L2_040_365G1_scaffold_436_28
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37406..37687)
DNA (282bp) protein (94aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH24_9FIRM
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:CBL19135.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Displaying 28 items

View Taxonomy