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L2_040_365G1_scaffold_438

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_438_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..439
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75864.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_438_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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681..2684
DNA (2004bp) protein (668aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase, B subunit n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI3_9FIRM
DNA gyrase, B subunit {ECO:0000313|EMBL:EES75863.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_438_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2757..5003
DNA (2247bp) protein (749aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI2_9FIRM
L2_040_365G1_scaffold_438_4
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5155..5619
DNA (465bp) protein (155aa)
Ribosome maturation factor RimP n=2 Tax=Ruminococcus RepID=C6JGI1_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_438_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5644..6864
DNA (1221bp) protein (407aa)
Transcription termination factor NusA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGI0_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
transcription termination factor NusA
L2_040_365G1_scaffold_438_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6848..7123
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75859.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L2_040_365G1_scaffold_438_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7113..7412
DNA (300bp) protein (100aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75858.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_040_365G1_scaffold_438_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7416..10256
DNA (2841bp) protein (947aa)
Translation initiation factor IF-2 n=2 Tax=Ruminococcus RepID=C6JGH7_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
bacterial translation initiation factor 2 (bIF-2)
L2_040_365G1_scaffold_438_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10425..10820
DNA (396bp) protein (132aa)
Ribosome-binding factor A n=2 Tax=Ruminococcus RepID=C6JGH6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
ribosome-binding factor A
L2_040_365G1_scaffold_438_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10835..11797
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JGH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75855.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Exopolyphosphatase-related proteins
L2_040_365G1_scaffold_438_11
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11797..12681
DNA (885bp) protein (295aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
tRNA pseudouridine synthase B (EC:4.2.1.70 5.4.99.12)
tRNA pseudouridine synthase B n=2 Tax=Ruminococcus RepID=C6JGH4_9FIRM
L2_040_365G1_scaffold_438_12
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12690..13586
DNA (897bp) protein (299aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=2 Tax=Ruminococcus RepID=C6JGH3_9FIRM
L2_040_365G1_scaffold_438_13
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


13728..13994
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Ruminococcus RepID=C6JGH2_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
SSU ribosomal protein S15P
L2_040_365G1_scaffold_438_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14407..16500
DNA (2094bp) protein (698aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Ruminococcus RepID=C6JGH1_9FIRM
L2_040_365G1_scaffold_438_15
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16537..16995
DNA (459bp) protein (153aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
ribonucleoside-triphosphate reductase class III activase subunit (EC:1.97.1.4 1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=Ruminococcus RepID=C6JGH0_9FIRM
L2_040_365G1_scaffold_438_16
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17260..17772
DNA (513bp) protein (171aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
DUTP diphosphatase n=2 Tax=Ruminococcus RepID=C6JGG9_9FIRM
DUTP diphosphatase {ECO:0000313|EMBL:EES75849.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L2_040_365G1_scaffold_438_17
unknown

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17717..17863
DNA (147bp) protein (49aa)

This feature has no annotations

L2_040_365G1_scaffold_438_18
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18064..19248
DNA (1185bp) protein (395aa)
Putative reductase BN806_00504 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Uncharacterized paraquat-inducible protein B (EC:1.3.1.44)
Putative reductase RSAG_03035 n=2 Tax=Ruminococcus RepID=C6JGG8_9FIRM
L2_040_365G1_scaffold_438_19
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(19315..20079)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N260_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF06631.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
L2_040_365G1_scaffold_438_20
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20300..22765
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002E4DCA5
Uncharacterized protein {ECO:0000313|EMBL:CDD77498.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
beta-mannosidase
L2_040_365G1_scaffold_438_21
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22996..23373)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CIC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77502.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
Protein of unknown function (DUF1292).
L2_040_365G1_scaffold_438_22
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23592..24347
DNA (756bp) protein (252aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CH09_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77504.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_438_23
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24411..26306
DNA (1896bp) protein (632aa)
Type II secretory pathway, pullulanase PulA and related glycosidases (EC:3.2.1.-)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77506.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_438_24
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26284..26838
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77508.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_438_25
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27354..28889
DNA (1536bp) protein (512aa)
Sodium/proline symporter n=2 Tax=Ruminococcus RepID=C6JGG2_9FIRM
Sodium/proline symporter {ECO:0000313|EMBL:EES75842.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
putP; sodium/proline symporter
L2_040_365G1_scaffold_438_26
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29063..30178
DNA (1116bp) protein (372aa)
glf; UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=2 Tax=Ruminococcus RepID=C6JGG1_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDD77512.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
L2_040_365G1_scaffold_438_27
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30250..30834
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD77513.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
L2_040_365G1_scaffold_438_28
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30867..33791
DNA (2925bp) protein (975aa)
Uncharacterized protein n=2 Tax=Ruminococcus RepID=C6JGF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES75839.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted Zn-dependent peptidases, insulinase-like
L2_040_365G1_scaffold_438_29
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33808..34716
DNA (909bp) protein (303aa)
GTPase Era n=2 Tax=Ruminococcus RepID=C6JGF8_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
GTP-binding protein Era
L2_040_365G1_scaffold_438_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34745..35497
DNA (753bp) protein (251aa)
DNA repair protein RecO n=2 Tax=Ruminococcus RepID=C6JGF7_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
DNA replication and repair protein RecO
Displaying items 1-30 of 68 in total

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