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L2_040_365G1_scaffold_445

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_445_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(709..1002)
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2AVA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI64040.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_445_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1125..1319
DNA (195bp) protein (65aa)
Restriction-modification system control element Bcll family protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AE07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54549.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
helix-turn-helix domain-containing protein
L2_040_365G1_scaffold_445_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1390..2358
DNA (969bp) protein (323aa)
Putative bactoprenol glucosyl transferase-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AX99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54550.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glycosyl transferase 2
L2_040_365G1_scaffold_445_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2339..2749
DNA (411bp) protein (137aa)
GtrA-like protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C423_9CLOT
GtrA-like protein {ECO:0000313|EMBL:ERI64037.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted membrane protein
L2_040_365G1_scaffold_445_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2786..3814
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32828.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_445_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3817..5622
DNA (1806bp) protein (602aa)
Copper amine oxidase domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AV99_9CLOT
Copper amine oxidase domain protein {ECO:0000313|EMBL:ERI64035.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_445_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5636..6853)
DNA (1218bp) protein (406aa)
Putative proton/sodium-glutamate symport protein GltT n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL7_9FIRM
Putative proton/sodium-glutamate symport protein GltT {ECO:0000313|EMBL:EHM37256.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sodium:dicarboxylate symporter
L2_040_365G1_scaffold_445_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6916..7797
DNA (882bp) protein (294aa)
Radical SAM domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXL6_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EHM37255.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
radical SAM protein
L2_040_365G1_scaffold_445_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7794..8402)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI64032.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_445_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8399..8899)
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YXL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32823.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_445_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9115..9531
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2AV95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32822.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_445_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9961..10878)
DNA (918bp) protein (306aa)
NlpC/P60 family protein n=2 Tax=Clostridiales RepID=U2AX90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54559.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
NLP/P60 protein
L2_040_365G1_scaffold_445_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10953..11243)
DNA (291bp) protein (97aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YXL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54560.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_040_365G1_scaffold_445_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11383..12720)
DNA (1338bp) protein (446aa)
Putative type IV conjugative transfer system protein TraL n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AV90_9CLOT
Putative type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:ERI64025.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_445_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12783..16556)
DNA (3774bp) protein (1258aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpoC; DNA-directed RNA polymerase beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF79_9FIRM
L2_040_365G1_scaffold_445_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16579..20286)
DNA (3708bp) protein (1236aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpoB; DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXK8_9FIRM
L2_040_365G1_scaffold_445_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20626..21978
DNA (1353bp) protein (451aa)
Putative arginine utilization regulatory protein RocR n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C407_9CLOT
Putative arginine utilization regulatory protein RocR {ECO:0000313|EMBL:ERI64022.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ATPase AAA
L2_040_365G1_scaffold_445_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22146..23738
DNA (1593bp) protein (531aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54566.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Predicted metal-dependent hydrolase with the TIM-barrel fold
L2_040_365G1_scaffold_445_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23789..25123
DNA (1335bp) protein (445aa)
Branched-chain amino acid transport system II carrier protein n=2 Tax=Clostridiales RepID=G9YXK5_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EHO32813.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
branched-chain amino acid ABC transporter substrate-binding protein
L2_040_365G1_scaffold_445_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25348..25590
DNA (243bp) protein (81aa)
50S ribosomal protein L7Ae family protein n=3 Tax=Clostridiales RepID=G9YXK3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54568.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
50S ribosomal protein L7
L2_040_365G1_scaffold_445_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25665..26087
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=3 Tax=Clostridiales RepID=G9YXK2_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rpsL; 30S ribosomal protein S12
L2_040_365G1_scaffold_445_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26297..26767
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF71_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ribosomal protein S7
L2_040_365G1_scaffold_445_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26782..28887
DNA (2106bp) protein (702aa)
Elongation factor G n=3 Tax=Clostridiales RepID=G9YXK0_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
fusA; elongation factor G
L2_040_365G1_scaffold_445_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29014..30213
DNA (1200bp) protein (400aa)
Elongation factor Tu n=3 Tax=Clostridiales RepID=G9YXJ9_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
tuf; elongation factor Tu
L2_040_365G1_scaffold_445_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30522..31391
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32807.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative mechanosensitive ion channelprotein,MscS family
L2_040_365G1_scaffold_445_26
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31388..31912
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32806.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein predicted by Glimmer/Critica
L2_040_365G1_scaffold_445_27
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31952..32428)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B1B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI71959.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_040_365G1_scaffold_445_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32532..33236
DNA (705bp) protein (235aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rsuA; pseudouridine synthase RsuA (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF65_9FIRM
L2_040_365G1_scaffold_445_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33506..34597
DNA (1092bp) protein (364aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=U2BJF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32803.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_040_365G1_scaffold_445_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34683..35375
DNA (693bp) protein (231aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridiales RepID=H1CF63_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EHO32802.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ftsE; cell division protein FtsE
Displaying items 1-30 of 32 in total

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