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L2_040_365G1_scaffold_455

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_455_1
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28..1758)
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CJK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90684.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_040_365G1_scaffold_455_2
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1846..2931)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D1N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI90685.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
hypothetical protein
L2_040_365G1_scaffold_455_3
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3137..4594)
DNA (1458bp) protein (486aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6K0_FINMA
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EUC77630.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
type I restriction-modification system
L2_040_365G1_scaffold_455_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(4594..6072)
DNA (1479bp) protein (493aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
type I restriction endonuclease subunit M n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B5A28E
N-6 DNA Methylase {ECO:0000313|EMBL:CCY27048.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L2_040_365G1_scaffold_455_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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comp(6093..6602)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EDX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98743.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_040_365G1_scaffold_455_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6618..8969)
DNA (2352bp) protein (784aa)
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Putative type-I restriction enzyme n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DNX2_9CLOT
Putative type-I restriction enzyme {ECO:0000313|EMBL:ERI81401.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L2_040_365G1_scaffold_455_7
unknown

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comp(9186..10256)
DNA (1071bp) protein (357aa)

This feature has no annotations

L2_040_365G1_scaffold_455_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10424..10999)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16758.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_040_365G1_scaffold_455_9
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11002..11541)
DNA (540bp) protein (180aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5Z2F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33190.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L2_040_365G1_scaffold_455_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11549..11869)
DNA (321bp) protein (107aa)
Stage III sporulation protein AF n=2 Tax=Lachnospiraceae RepID=L1Q6Z3_9FIRM
Stage III sporulation protein AF {ECO:0000313|EMBL:EKY23696.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Stage III sporulation protein AF (Spore_III_AF).
L2_040_365G1_scaffold_455_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11998..13125)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16761.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Stage III sporulation protein AE (spore_III_AE).
L2_040_365G1_scaffold_455_12
unknown

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comp(13122..13511)
DNA (390bp) protein (130aa)
Stage III sporulation protein AC/AD protein family n=2 Tax=Clostridiales RepID=D4N0G5_9FIRM
Stage III sporulation protein AC/AD protein family.
Stage III sporulation protein AC/AD protein family {ECO:0000313|EMBL:CBL38360.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_040_365G1_scaffold_455_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13533..13730)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=6 Tax=Firmicutes RepID=D4N0G4_9FIRM
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CDA33194.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_040_365G1_scaffold_455_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13767..14258)
DNA (492bp) protein (164aa)
Putative stage III sporulation protein AB n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z2F8_9FIRM
Putative stage III sporulation protein AB {ECO:0000313|EMBL:CDA33195.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
sporulation stage III protein AB
L2_040_365G1_scaffold_455_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14282..15208)
DNA (927bp) protein (309aa)
Stage III sporulation protein AA n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6Y8_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:EKY23691.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
stage III sporulation protein AA
L2_040_365G1_scaffold_455_16
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15282..17261)
DNA (1980bp) protein (660aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1B6_9CLOT
L2_040_365G1_scaffold_455_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17403..18041
DNA (639bp) protein (213aa)
Uncharacterised ACR, YkgG family COG1556 n=4 Tax=Clostridiales RepID=D4N0G2_9FIRM
Uncharacterised ACR, YkgG family COG1556.
Uncharacterized protein {ECO:0000313|EMBL:CDA33198.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_040_365G1_scaffold_455_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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18236..19174
DNA (939bp) protein (313aa)
Transcriptional regulator, AraC family n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6V3_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY23688.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
AraC-type DNA-binding domain-containing proteins
L2_040_365G1_scaffold_455_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19143..19532)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=L1Q7U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY23687.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L2_040_365G1_scaffold_455_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19558..21066)
DNA (1509bp) protein (503aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6Y4_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EKY23686.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L2_040_365G1_scaffold_455_21
unknown

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comp(21085..22320)
DNA (1236bp) protein (412aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL38353.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL38353.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Serine hydroxymethyltransferase n=5 Tax=Clostridiales RepID=D4N0F8_9FIRM
L2_040_365G1_scaffold_455_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22413..22883)
DNA (471bp) protein (157aa)
ACT domain-containing protein n=3 Tax=Lachnospiraceae RepID=E5VK33_9FIRM
ACT domain-containing protein {ECO:0000313|EMBL:EFV16772.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Aspartokinases
L2_040_365G1_scaffold_455_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(22888..24681)
DNA (1794bp) protein (598aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6U8_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:EKY23683.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_040_365G1_scaffold_455_24
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24758..25276)
DNA (519bp) protein (173aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=4 Tax=Clostridiales RepID=D4N0F5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Uncharacterized protein {ECO:0000313|EMBL:EDS21675.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_040_365G1_scaffold_455_25
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25362..26606)
DNA (1245bp) protein (415aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Lachnospiraceae RepID=E5VK36_9FIRM
L2_040_365G1_scaffold_455_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26603..27226)
DNA (624bp) protein (208aa)
Uncharacterized domain HDIG n=4 Tax=Clostridiales RepID=D4N0F3_9FIRM
uncharacterized domain HDIG
HD domain-containing protein {ECO:0000313|EMBL:EFV16776.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_040_365G1_scaffold_455_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27241..28671)
DNA (1431bp) protein (477aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Radical SAM superfamily protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK38_9FIRM
Radical SAM superfamily protein {ECO:0000313|EMBL:EFV16777.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_040_365G1_scaffold_455_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28675..29334)
DNA (660bp) protein (220aa)
Metallo-beta-lactamase superfamily protein n=3 Tax=Lachnospiraceae RepID=E5VK39_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EKY23678.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Zn-dependent hydrolases, including glyoxylases
L2_040_365G1_scaffold_455_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29343..31640)
DNA (2298bp) protein (766aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z8X2_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:CDA33209.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_040_365G1_scaffold_455_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31667..32086)
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase, regulatory subunit n=5 Tax=Clostridiales RepID=D4N0E9_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase {ECO:0000313|EMBL:EFV16780.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying items 1-30 of 36 in total

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