ggKbase home page

L2_040_365G1_scaffold_458

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_458_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4..120)
DNA (117bp) protein (39aa)
Uncharacterized protein n=9 Tax=Bacteroides RepID=I0PYP2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EYE42787.1}; TaxID=1339318 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S6L5.;"
L2_040_365G1_scaffold_458_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

146..280
DNA (135bp) protein (45aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=I8XS15_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EXY88370.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
hypothetical protein
L2_040_365G1_scaffold_458_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(581..2188)
DNA (1608bp) protein (536aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
Phosphoenolpyruvate carboxykinase [ATP] n=14 Tax=Bacteroides RepID=PCKA_BACFN
pckA; putative phosphoenolpyruvate carboxykinase
L2_040_365G1_scaffold_458_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2453..3106
DNA (654bp) protein (218aa)
Uracil phosphoribosyltransferase n=13 Tax=Bacteroides RepID=Q64MV5_BACFR
putative uracil phosphoribosyltransferase
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EYE41585.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_040_365G1_scaffold_458_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3340..4101
DNA (762bp) protein (254aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=C6IB08_9BACE
ugpQ; putative glycerophosphoryl diester phosphodiesterase
Uncharacterized protein {ECO:0000313|EMBL:EIY92710.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L2_040_365G1_scaffold_458_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4180..5190)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9JZK4_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92709.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
2-oxoglutarate synthase subunit KorB
L2_040_365G1_scaffold_458_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5194..7044)
DNA (1851bp) protein (617aa)
2-oxoglutarate synthase subunit KorA n=9 Tax=Bacteroides RepID=Q64MW0_BACFR
2-oxoglutarate synthase subunit KorA
Acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EXZ76533.1}; TaxID=1339335 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3-F-2 #6.;"
L2_040_365G1_scaffold_458_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7689..10712)
DNA (3024bp) protein (1008aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=E1WQV0_BACF6
putative protein-export transmembrane SecDF protein
Protein-export membrane protein SecD {ECO:0000313|EMBL:EXY82342.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L2_040_365G1_scaffold_458_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10892..11359)
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9V2V7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92706.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_458_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11524..12621)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=12 Tax=Bacteroides RepID=E1WQU8_BACF6
hypothetical protein
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:EXY88366.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L2_040_365G1_scaffold_458_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12625..13524)
DNA (900bp) protein (300aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=Q64MX5_BACFR
putative transmembrane rhomboid family protein
Uncharacterized protein {ECO:0000313|EMBL:EKA86368.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L2_040_365G1_scaffold_458_12
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13505..14179)
DNA (675bp) protein (225aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C6IB30_9BACE
putative transmembrane rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:EXZ42410.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_040_365G1_scaffold_458_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14427..14699
DNA (273bp) protein (91aa)
DNA-binding protein HU-beta n=14 Tax=Bacteroides RepID=Q64MX7_BACFR
hup3; putative histone-like DNA-binding protein HU3
DNA-binding protein HU {ECO:0000313|EMBL:EYE41619.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L2_040_365G1_scaffold_458_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


14787..16580
DNA (1794bp) protein (598aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
Arginine--tRNA ligase n=7 Tax=Bacteroides RepID=E1WQU4_BACF6
argS; putative arginyl-tRNA synthetase
L2_040_365G1_scaffold_458_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16766..17749)
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9AQ71_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92700.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_458_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17921..20266)
DNA (2346bp) protein (782aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
DNA topoisomerase 1 n=10 Tax=Bacteroides RepID=Q64MY0_BACFR
DNA topoisomerase I
L2_040_365G1_scaffold_458_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20545..22248)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9JRA7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92698.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative TonB-dependent receptor
L2_040_365G1_scaffold_458_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22255..25263)
DNA (3009bp) protein (1003aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=C6IB36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKA86375.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
putative TPR-repeat protein
L2_040_365G1_scaffold_458_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25303..25824)
DNA (522bp) protein (174aa)
Hydrolase, NUDIX family n=14 Tax=Bacteroides RepID=D1JVC7_9BACE
putative MutT/NUDIX family protein
NUDIX domain protein {ECO:0000313|EMBL:EXZ42402.1}; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
L2_040_365G1_scaffold_458_20
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25873..25998)
DNA (126bp) protein (42aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=I0PYP0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD44133.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L2_040_365G1_scaffold_458_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26024..27682
DNA (1659bp) protein (553aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9JZJ0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92694.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_458_22
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28576..29718
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5L7R5_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEZ24179.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L2_040_365G1_scaffold_458_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29777..30976
DNA (1200bp) protein (400aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I9APE6_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92692.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
putative lipoprotein
L2_040_365G1_scaffold_458_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30973..32457
DNA (1485bp) protein (495aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9V2X0_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92691.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
radical SAM domain-containing protein
L2_040_365G1_scaffold_458_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32469..33686
DNA (1218bp) protein (406aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9AQ79_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92690.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_458_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34097..34456
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JVD2_9BACE
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EXZ71187.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
putative DNA-binding protein
L2_040_365G1_scaffold_458_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34626..35933
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I9JRB7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY92688.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
hypothetical protein
L2_040_365G1_scaffold_458_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36118..36231
DNA (114bp) protein (38aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WQT2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD51145.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
Displaying 28 items

View Taxonomy