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L2_040_365G1_scaffold_466

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_466_1

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1..285
DNA (285bp) protein (95aa)
D-ribose transporter ATP binding protein n=2 Tax=human gut metagenome RepID=K1U4E4_9ZZZZ
Ribose ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:EKC80447.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
D-ribose transporter ATP-binding protein
L2_040_365G1_scaffold_466_2
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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288..1274
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JAS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28247.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
ABC-type transporter, integral membrane subunit
L2_040_365G1_scaffold_466_3
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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1280..2974
DNA (1695bp) protein (565aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J2I8_9FIRM
beta-hexosaminidase
L2_040_365G1_scaffold_466_4
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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2984..3280
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J229_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28245.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L2_040_365G1_scaffold_466_5
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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3373..4578
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J253_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS28244.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
L2_040_365G1_scaffold_466_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4798..5253
DNA (456bp) protein (152aa)
Transposase IS200-family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY93_ROSHA
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:AEN97681.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L2_040_365G1_scaffold_466_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5414..5920)
DNA (507bp) protein (169aa)
Adenylate cyclase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X8N2_9CLOT
Adenylate cyclase {ECO:0000313|EMBL:CDD02732.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
adenylate cyclase
L2_040_365G1_scaffold_466_8
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6359..7675
DNA (1317bp) protein (439aa)
transposase IS4 n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B54DF5
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ADZ82979.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L2_040_365G1_scaffold_466_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7990..9036
DNA (1047bp) protein (349aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W027_9CLOT
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDD02750.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter substrate-binding protein
L2_040_365G1_scaffold_466_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9045..10541
DNA (1497bp) protein (499aa)
two component system histidine kinase (EC:2.7.13.3)
Two component system histidine kinase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X8P5_9CLOT
Two component system histidine kinase {ECO:0000313|EMBL:CDD02747.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_040_365G1_scaffold_466_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10534..12150
DNA (1617bp) protein (539aa)
Two component system response regulator n=1 Tax=Clostridium sp. CAG:91 RepID=R6W7K2_9CLOT
Two component system response regulator {ECO:0000313|EMBL:CDD02744.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
two component system response regulator
L2_040_365G1_scaffold_466_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12152..13201
DNA (1050bp) protein (350aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Clostridium sp. CAG:91 RepID=R6W015_9CLOT
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDD02740.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter substrate-binding protein
L2_040_365G1_scaffold_466_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13403..14566
DNA (1164bp) protein (388aa)
Xylose ABC transporter substrate-binding protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVI1_9CLOT
Xylose ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDD02738.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter substrate-binding protein
L2_040_365G1_scaffold_466_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14698..16242
DNA (1545bp) protein (515aa)
L-arabinose transport ATP-binding protein AraG n=1 Tax=Clostridium sp. CAG:91 RepID=R6WEZ3_9CLOT
L-arabinose transport ATP-binding protein AraG {ECO:0000313|EMBL:CDD02736.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter ATP-binding protein
L2_040_365G1_scaffold_466_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16239..17429
DNA (1191bp) protein (397aa)
Xylose ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W7J2_9CLOT
Xylose ABC transporter permease protein {ECO:0000313|EMBL:CDD02734.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sugar ABC transporter permease
L2_040_365G1_scaffold_466_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17506..19275
DNA (1770bp) protein (590aa)
Uncharacterized protein n=2 Tax=root RepID=R6VVH6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02733.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Methyl-accepting chemotaxis protein
L2_040_365G1_scaffold_466_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19347..19856)
DNA (510bp) protein (170aa)
Adenylate cyclase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X8N2_9CLOT
Adenylate cyclase {ECO:0000313|EMBL:CDD02732.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
adenylate cyclase
L2_040_365G1_scaffold_466_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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20067..20618
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EKT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97974.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DJ-1 family protein
L2_040_365G1_scaffold_466_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20648..21703
DNA (1056bp) protein (352aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
gmd; putative GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=2 Tax=root RepID=R6VV00_9CLOT
L2_040_365G1_scaffold_466_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21738..22679
DNA (942bp) protein (314aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
GDP-L-fucose synthase n=2 Tax=root RepID=R6X833_9CLOT
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase
L2_040_365G1_scaffold_466_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22639..24102
DNA (1464bp) protein (488aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
M18 family aminopeptidase n=2 Tax=root RepID=R6WEG2_9CLOT
aminopeptidase 2
L2_040_365G1_scaffold_466_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24227..24628
DNA (402bp) protein (134aa)
Hemerythrin n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZK0_9CLOT
Hemerythrin {ECO:0000313|EMBL:CDD02525.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hemerythrin
L2_040_365G1_scaffold_466_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24701..26545
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WEF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02521.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Subtilisin-like serine proteases
L2_040_365G1_scaffold_466_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26787..27851
DNA (1065bp) protein (355aa)
transcriptional regulator, LacI family (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium sp. CAG:91 RepID=R6X819_9CLOT
Alanine racemase {ECO:0000313|EMBL:CDD02517.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_040_365G1_scaffold_466_25
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28126..29469
DNA (1344bp) protein (448aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VUY8_9CLOT
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:CDD02513.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
family 1 extracellular solute-binding protein
L2_040_365G1_scaffold_466_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29735..31159
DNA (1425bp) protein (475aa)
Cyclodextrin ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZI5_9CLOT
Cyclodextrin ABC transporter permease protein {ECO:0000313|EMBL:CDD02505.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_040_365G1_scaffold_466_27
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31159..32001
DNA (843bp) protein (281aa)
Cyclodextrin ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WEE1_9CLOT
Cyclodextrin ABC transporter permease protein {ECO:0000313|EMBL:CDD02501.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter permease
L2_040_365G1_scaffold_466_28
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32085..33194
DNA (1110bp) protein (370aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Glycosyl hydrolase family 53 n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZH7_9CLOT
L2_040_365G1_scaffold_466_29
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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33436..35274
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FII4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01877.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L2_040_365G1_scaffold_466_30
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35247..35465
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X7Z6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02497.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
Displaying 30 items

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