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L2_040_365G1_scaffold_511

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_511_1
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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235..1110
DNA (876bp) protein (292aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:149 RepID=R5LSD6_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCY82150.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Predicted transcriptional regulators
L2_040_365G1_scaffold_511_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1194..3041)
DNA (1848bp) protein (616aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5B4_9CLOT
Predicted signal transduction protein with a C-terminal ATPase domain
L2_040_365G1_scaffold_511_3
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3041..4588)
DNA (1548bp) protein (516aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96461.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_040_365G1_scaffold_511_4
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4607..5527)
DNA (921bp) protein (307aa)
Putative permease n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K822_CLOPA
putative permease
Putative permease {ECO:0000313|EMBL:AGK96664.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L2_040_365G1_scaffold_511_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5839..6093
DNA (255bp) protein (85aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RTG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12954.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
phosphotransferase system, phosphocarrier protein HPr
L2_040_365G1_scaffold_511_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6479..7048
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44163.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_511_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7083..7934
DNA (852bp) protein (284aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WJ56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ17848.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sugar phosphate isomerase
L2_040_365G1_scaffold_511_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8064..9386)
DNA (1323bp) protein (441aa)
MATE efflux family protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MZB6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS76394.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
putative efflux protein, MATE family
L2_040_365G1_scaffold_511_9
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9641..11257)
DNA (1617bp) protein (539aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB60969.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
polysaccharide biosynthesis protein
L2_040_365G1_scaffold_511_10
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11549..12733
DNA (1185bp) protein (395aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Cysteine desulfurase NifS n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ19_9CLOT
cysteine desulfurase NifS
L2_040_365G1_scaffold_511_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12774..13211
DNA (438bp) protein (146aa)
FeS cluster assembly scaffold protein NifU n=10 Tax=Clostridium RepID=G5I6V3_9CLOT
FeS cluster assembly scaffold protein NifU {ECO:0000313|EMBL:ENZ17863.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L2_040_365G1_scaffold_511_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13208..14284
DNA (1077bp) protein (359aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5I7_9CLOT
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase
L2_040_365G1_scaffold_511_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14281..15336
DNA (1056bp) protein (352aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RYR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14662.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L2_040_365G1_scaffold_511_14
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15535..16365
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQ15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96434.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L2_040_365G1_scaffold_511_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16583..17392
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPZ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44170.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_511_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

17533..20256
DNA (2724bp) protein (908aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RLG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33757.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
small GTP-binding protein domain
L2_040_365G1_scaffold_511_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20204..21406
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5J2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44172.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
FliB family protein
L2_040_365G1_scaffold_511_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21546..22382
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 IPR3_9CLOT">RepID=R5IPR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44173.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATPases involved in chromosome partitioning
L2_040_365G1_scaffold_511_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22406..23119
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IV01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44174.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
RelA/SpoT domain-containing protein
L2_040_365G1_scaffold_511_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23154..23957)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44175.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
N-acetyltransferase GCN5
L2_040_365G1_scaffold_511_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24155..24520
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J559_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44176.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Putative effector of murein hydrolase LrgA
L2_040_365G1_scaffold_511_22
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24522..25226
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KG93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61242.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Putative effector of murein hydrolase
L2_040_365G1_scaffold_511_23
unknown

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25365..25505
DNA (141bp) protein (47aa)

This feature has no annotations

L2_040_365G1_scaffold_511_24
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25638..26474
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00468.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
MerR family transcriptional regulator
L2_040_365G1_scaffold_511_25
unknown

Not on your lists

26479..26646
DNA (168bp) protein (56aa)

This feature has no annotations

L2_040_365G1_scaffold_511_26
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26777..27064
DNA (288bp) protein (96aa)
Microcompartments protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R1J3_CLOSW
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ADL06516.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_040_365G1_scaffold_511_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27083..28090
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG53321.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_040_365G1_scaffold_511_28
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28092..28376
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDI1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ73226.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L2_040_365G1_scaffold_511_29
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28395..28691
DNA (297bp) protein (99aa)
BMC domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EEA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHF00464.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
microcompartment shellprotein
L2_040_365G1_scaffold_511_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28724..29035
DNA (312bp) protein (104aa)
Propanediol utilization protein PduA n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XHB6_9CLOT
Propanediol utilization protein PduA {ECO:0000313|EMBL:ENY95333.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
microcompartments protein
Displaying items 1-30 of 33 in total

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