ggKbase home page

L2_040_365G1_scaffold_513

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_513_1
unknown

Not on your lists

3..278
DNA (276bp) protein (92aa)

This feature has no annotations

L2_040_365G1_scaffold_513_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(195..995)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD02823.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1037..2095)
DNA (1059bp) protein (353aa)
pectinesterase (EC:3.1.1.11)
Pectinesterase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W0B0_9CLOT
Pectinesterase {ECO:0000313|EMBL:CDD02820.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_040_365G1_scaffold_513_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2270..3340)
DNA (1071bp) protein (357aa)
HD-GYP domain-containing protein n=2 Tax=root RepID=R6X8U9_9CLOT
HD-GYP domain-containing protein {ECO:0000313|EMBL:CDD02817.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
HD-GYP domain-containing protein
L2_040_365G1_scaffold_513_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

3560..6181
DNA (2622bp) protein (874aa)
Protein translocase subunit SecA n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FCF0_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
secA; preprotein translocase subunit SecA
L2_040_365G1_scaffold_513_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

6453..7463
DNA (1011bp) protein (337aa)
Peptide chain release factor 2 n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EIN0_9FIRM
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
bacterial peptide chain release factor 2 (bRF-2)
L2_040_365G1_scaffold_513_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

7547..8284
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ERF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99754.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L2_040_365G1_scaffold_513_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8281..9051)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WAD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01131.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Protein of unknown function (DUF975).
L2_040_365G1_scaffold_513_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9155..9505)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VR39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01133.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9634..12126
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VVV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD01135.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
S1 RNA binding domain-containing protein
L2_040_365G1_scaffold_513_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12428..13165)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W9G2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00831.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13693..14412
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=root RepID=R6VUZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00835.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC transporter ATP-binding protein
L2_040_365G1_scaffold_513_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14520..16091
DNA (1572bp) protein (524aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6X2W4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00837.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
RND family transporter
L2_040_365G1_scaffold_513_14
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

16139..17317
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FCE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99747.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type antimicrobial peptide transport system, permease component
L2_040_365G1_scaffold_513_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17539..18015
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W9H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00841.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18203..18679
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W3Y6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04185.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18676..19434
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WJ83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04186.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L2_040_365G1_scaffold_513_18

Not on your lists

19431..19868
DNA (438bp) protein (146aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EKC64909.1}; EC=2.3.1.- {ECO:0000313|EMBL:EKC64909.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=human gut metagenome RepID=K1TBR5_9ZZZZ
ribosomal-protein-alanine acetyltransferase
L2_040_365G1_scaffold_513_19

Not on your lists

19960..20199
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1S0D2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC51058.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_040_365G1_scaffold_513_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20246..21160
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Clostridium sp. CAG:91 RepID=R6VZH6_9CLOT
L2_040_365G1_scaffold_513_21
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21188..21772
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=root RepID=R6W3Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD04195.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_513_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21792..22829
DNA (1038bp) protein (346aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6XCZ5_9CLOT
L2_040_365G1_scaffold_513_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22867..23694
DNA (828bp) protein (276aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ispD1; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=root RepID=R6WBH5_9CLOT
L2_040_365G1_scaffold_513_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23749..25932)
DNA (2184bp) protein (728aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Clostridium sp. CAG:91 RepID=R6W400_9CLOT
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDD04200.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
AraC-type DNA-binding domain-containing proteins
L2_040_365G1_scaffold_513_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

26212..27915
DNA (1704bp) protein (568aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FCC5_9FIRM
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDA99732.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sugar ABC transporter substrate-binding protein
L2_040_365G1_scaffold_513_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

28053..29018
DNA (966bp) protein (322aa)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ESE0_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CDA99731.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sugar ABC transporter permease
L2_040_365G1_scaffold_513_27
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

29031..29891
DNA (861bp) protein (287aa)
Sugar ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ERD9_9FIRM
Sugar ABC transporter permease protein {ECO:0000313|EMBL:CDA99729.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sugar ABC transporter permease
L2_040_365G1_scaffold_513_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

30010..30702
DNA (693bp) protein (231aa)
Carbohydrate esterase Family 12 YesY n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ESD5_9FIRM
Carbohydrate esterase Family 12 YesY {ECO:0000313|EMBL:CDA99726.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Lysophospholipase L1 and related esterases
L2_040_365G1_scaffold_513_29
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30845..32851
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W7P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00176.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
Displaying 29 items

View Taxonomy