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L2_040_365G1_scaffold_522

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_522_1
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(448..2325)
DNA (1878bp) protein (626aa)
CHC2 zinc finger domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD84_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EET61318.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
RecA-family ATPase
L2_040_365G1_scaffold_522_2
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2342..4003)
DNA (1662bp) protein (554aa)
MobA/MobL family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD82_9FIRM
MobA/MobL family protein {ECO:0000313|EMBL:EET61316.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_040_365G1_scaffold_522_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4103..4399)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium innocuum 2959 RepID=N9WLI6_CLOIN
Uncharacterized protein {ECO:0000313|EMBL:ENY84331.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_040_365G1_scaffold_522_4
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4512..5534)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25999.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L2_040_365G1_scaffold_522_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5531..6091)
DNA (561bp) protein (187aa)
Sigma-70 region 2 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLS9_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EHM54621.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
RNA polymerase sigma factor, sigma-70 family
L2_040_365G1_scaffold_522_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6175..6477)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM54620.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_040_365G1_scaffold_522_7
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6612..6827)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61312.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L2_040_365G1_scaffold_522_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6907..8757)
DNA (1851bp) protein (617aa)
Resolvase, N-terminal domain protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LD77_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EET61311.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_040_365G1_scaffold_522_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8803..9111)
DNA (309bp) protein (103aa)
TraG family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLI1_9CLOT
TraG family protein {ECO:0000313|EMBL:EEA83106.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Type IV secretory pathway, VirD4 components
L2_040_365G1_scaffold_522_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9108..9584)
DNA (477bp) protein (159aa)
conjugative transposon protein n=1 Tax=Clostridium difficile RepID=UPI0003709D43
Uncharacterized protein {ECO:0000313|EMBL:EQJ63171.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
conjugative transposon protein
L2_040_365G1_scaffold_522_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9630..9848)
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5ZS28_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU98897.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L2_040_365G1_scaffold_522_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9863..10777)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GH01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98896.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L2_040_365G1_scaffold_522_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11338..12468)
DNA (1131bp) protein (377aa)
Site-specific recombinase, phage integrase family n=2 Tax=Lachnospiraceae RepID=A5KNS8_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDK23826.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L2_040_365G1_scaffold_522_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12586..12786)
DNA (201bp) protein (67aa)
DNA binding domain excisionase family n=3 Tax=Lachnospiraceae RepID=R7E7U6_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDN76373.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L2_040_365G1_scaffold_522_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12828..13643)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN76374.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
phage DNA replication protein (predicted replicative helicase loader)
L2_040_365G1_scaffold_522_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13643..14170)
DNA (528bp) protein (176aa)
Replication initiator protein A domain protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7B3_RUMGN
Replication initiator protein A domain protein {ECO:0000313|EMBL:EDN76375.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Replication initiator protein A (RepA) N-terminus.
L2_040_365G1_scaffold_522_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14935..15219
DNA (285bp) protein (95aa)
Transposase n=4 Tax=Clostridiales RepID=D4LLC4_9FIRM
hypothetical protein
Transposase {ECO:0000313|EMBL:EDY32013.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
L2_040_365G1_scaffold_522_18
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15216..16130
DNA (915bp) protein (305aa)
Transposase and inactivated derivatives n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2I7_9FIRM
Transposase and inactivated derivatives
Transposase and inactivated derivatives {ECO:0000313|EMBL:CBL13827.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_040_365G1_scaffold_522_19
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16162..16599)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WNB1_9FIRM
Predicted permease.
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EDR45820.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L2_040_365G1_scaffold_522_20
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16765..17181
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AYW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG80286.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L2_040_365G1_scaffold_522_21
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17308..18330)
DNA (1023bp) protein (341aa)
Site-specific recombinase XerD n=1 Tax=Coprococcus catus GD/7 RepID=D4J4V8_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK79379.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_040_365G1_scaffold_522_22
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18320..19303)
DNA (984bp) protein (328aa)
Site-specific recombinase XerD n=1 Tax=Coprococcus catus GD/7 RepID=D4J4V9_9FIRM
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK79380.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_040_365G1_scaffold_522_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19300..21210)
DNA (1911bp) protein (637aa)
Phage-related integrase n=1 Tax=Clostridium sp. D5 RepID=F0YWF5_9CLOT
Phage-related integrase {ECO:0000313|EMBL:EGB93993.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
integrase family protein
L2_040_365G1_scaffold_522_24
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21378..21746)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R187_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF44434.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L2_040_365G1_scaffold_522_25
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21930..26801)
DNA (4872bp) protein (1624aa)
Stage V sporulation protein K n=2 Tax=Bacillus cereus RepID=Q73CC2_BACC1
Stage V sporulation protein K {ECO:0000313|EMBL:AAS40074.1}; TaxID=222523 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain ATCC 10987 / NRS 248).;"
stage V sporulation protein K
L2_040_365G1_scaffold_522_26
R_Saccharibacteria_45_15, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(26817..29312)
DNA (2496bp) protein (832aa)
2-alkenal reductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZG8_9BACT
Heat shock protein 70
Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated
L2_040_365G1_scaffold_522_27
unknown

Not on your lists

comp(29309..29815)
DNA (507bp) protein (169aa)

This feature has no annotations

L2_040_365G1_scaffold_522_28
Rhizophagus irregularis, Rhizophagus, Glomerales, Glomeromycetes, Glomeromycota, Fungi

Not on your lists

comp(29840..33196)
DNA (3357bp) protein (1119aa)
Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) RepID=U9UT39_RHIID
Skt5p {ECO:0000313|EMBL:EXX55672.1}; TaxID=1432141 species="Eukaryota; Fungi; Glomeromycota; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus.;" source="Rhizophagus irregularis DAOM 197198w.;"
hypothetical protein
Displaying 28 items

View Taxonomy