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L2_040_365G1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_554_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(158..1465)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44154.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1465..3186)
DNA (1722bp) protein (574aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPX9_9CLOT
phosphoenolpyruvate-protein phosphotransferase
L2_040_365G1_scaffold_554_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3553..3816)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J541_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44156.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PTS system phosphocarrier protein HPr
L2_040_365G1_scaffold_554_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3890..5236)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5H7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44157.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5214..6098)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPQ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44158.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
conserved hypothetical protein TIGR00159
L2_040_365G1_scaffold_554_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6137..7093)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44159.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7090..7512)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44160.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7773..9062
DNA (1290bp) protein (430aa)
N-acetyllactosaminide beta-1 6-N-acetylglucosaminyl-transferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J547_9CLOT
N-acetyllactosaminide beta-1 6-N-acetylglucosaminyl-transferase {ECO:0000313|EMBL:CCY44161.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9195..9527)
DNA (333bp) protein (111aa)
Predicted branched-chain amino acid permeases (Azaleucine resistance) n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILW1_9CLOT
Predicted branched-chain amino acid permeases (Azaleucine resistance) {ECO:0000313|EMBL:CCY41304.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted branched-chain amino acid permeases (azaleucine resistance)
L2_040_365G1_scaffold_554_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9524..10375)
DNA (852bp) protein (284aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX59_9CLOT
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CCY41306.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Predicted branched-chain amino acid permease (azaleucine resistance)
L2_040_365G1_scaffold_554_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10582..11106)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41310.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
dimethylsulfoxide reductase subunit B
L2_040_365G1_scaffold_554_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11103..13238)
DNA (2136bp) protein (712aa)
anaerobic dehydrogenase (EC:1.7.99.4)
Molybdopterin oxidoreductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWZ7_9CLOT
Molybdopterin oxidoreductase {ECO:0000313|EMBL:CCY41312.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L2_040_365G1_scaffold_554_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13231..14490)
DNA (1260bp) protein (420aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CW21_9CLOT
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEG56713.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyridine nucleotide-disulfide oxidoreductase
L2_040_365G1_scaffold_554_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14576..15883)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41323.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid transporter
L2_040_365G1_scaffold_554_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15886..17067)
DNA (1182bp) protein (394aa)
PatB n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILY4_9CLOT
PatB {ECO:0000313|EMBL:CCY41324.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
bifunctional beta-cystathionase/maltose regulon repressor
L2_040_365G1_scaffold_554_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17275..18000)
DNA (726bp) protein (242aa)
Transcriptional regulator GntR family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX79_9CLOT
Transcriptional regulator GntR family {ECO:0000313|EMBL:CCY41326.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transcriptional regulator, GntR family
L2_040_365G1_scaffold_554_17
unknown

Not on your lists

comp(17993..18127)
DNA (135bp) protein (45aa)

This feature has no annotations

L2_040_365G1_scaffold_554_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18327..19295)
DNA (969bp) protein (323aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX15_9CLOT
nifR3 family TIM-barrel protein
L2_040_365G1_scaffold_554_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19285..19671)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41328.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19864..20838)
DNA (975bp) protein (325aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
6-phosphofructokinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILY8_9CLOT
6-phosphofructokinase
L2_040_365G1_scaffold_554_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20926..24405)
DNA (3480bp) protein (1160aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX84_9CLOT
L2_040_365G1_scaffold_554_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24690..24944)
DNA (255bp) protein (85aa)
Phosphotransferase system n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX20_9CLOT
Phosphotransferase system {ECO:0000313|EMBL:CCY41332.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Phosphotransferase System HPr (HPr) Family
L2_040_365G1_scaffold_554_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24998..25948)
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX90_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25976..26845)
DNA (870bp) protein (290aa)
UPF0042 nucleotide-binding protein BN757_01633 n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGR8_9CLOT
Nucleotide-binding protein BN757_01633 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_554_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26842..27792)
DNA (951bp) protein (317aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IM00_9CLOT
L2_040_365G1_scaffold_554_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27913..28851)
DNA (939bp) protein (313aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
HPr kinase/phosphorylase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX96_9CLOT
HPr kinase
L2_040_365G1_scaffold_554_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28942..30861)
DNA (1920bp) protein (640aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGS2_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
excinuclease ABC subunit C
L2_040_365G1_scaffold_554_28
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30864..31448)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41345.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Protein of unknown function (DUF1653).
L2_040_365G1_scaffold_554_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31823..33442)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IX37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41347.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
mannitol dehydrogenase
L2_040_365G1_scaffold_554_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33833..33973)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41348.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Displaying items 1-30 of 34 in total

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