ggKbase home page

L2_040_365G1_scaffold_590

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_590_1
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..992)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VX59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99009.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
peptidoglycan glycosyltransferase
L2_040_365G1_scaffold_590_2
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1065..3290)
DNA (2226bp) protein (742aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99008.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ftsI; cell division protein FtsI
L2_040_365G1_scaffold_590_3
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3345..3821)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VX53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC99004.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ftsL; cell division protein FtsL
L2_040_365G1_scaffold_590_4
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3834..4772)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
mraW; S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:91 RepID=R6VPQ1_9CLOT
L2_040_365G1_scaffold_590_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4799..5245)
DNA (447bp) protein (149aa)
Protein MraZ n=1 Tax=Clostridium sp. CAG:91 RepID=R6WY44_9CLOT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
MraZ protein
L2_040_365G1_scaffold_590_6
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5530..6405)
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium sp. CAG:91 RepID=R6W4A3_9CLOT
L2_040_365G1_scaffold_590_7
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6672..7769)
DNA (1098bp) protein (366aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKG8_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
GTP-binding protein YchF
L2_040_365G1_scaffold_590_8
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7952..8998
DNA (1047bp) protein (349aa)
Predicted acyltransferases n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKG2_9CLOT
Predicted acyltransferases {ECO:0000313|EMBL:CDC98988.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted acyltransferases
L2_040_365G1_scaffold_590_9
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8973..10145)
DNA (1173bp) protein (391aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=root RepID=R6VPL0_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDC98985.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
L2_040_365G1_scaffold_590_10
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10251..11516)
DNA (1266bp) protein (422aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium sp. CAG:91 RepID=R6WY06_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDC98982.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methyl-accepting chemotaxis sensory transducer
L2_040_365G1_scaffold_590_11
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11615..12769)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC98978.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
toxic anion resistance family protein
L2_040_365G1_scaffold_590_12
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12844..14241)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W462_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC98976.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_590_13
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14244..15137)
DNA (894bp) protein (298aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWY7_9CLOT
GTPase
L2_040_365G1_scaffold_590_14
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15156..17294)
DNA (2139bp) protein (713aa)
Uncharacterized protein n=3 Tax=root RepID=R6W457_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC98971.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
serine/threonine protein kinase, bacterial
L2_040_365G1_scaffold_590_15
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17328..17975)
DNA (648bp) protein (216aa)
Serine/threonine protein phosphatase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VWY2_9CLOT
Serine/threonine protein phosphatase {ECO:0000313|EMBL:CDC98969.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Ser/Thr protein phosphatase
L2_040_365G1_scaffold_590_16
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18058..19131)
DNA (1074bp) protein (358aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:91 RepID=R6WXY8_9CLOT
L2_040_365G1_scaffold_590_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19157..20380)
DNA (1224bp) protein (408aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sun; rRNA small subunit methyltransferase B Sun (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=2 Tax=root RepID=R6VWX6_9CLOT
L2_040_365G1_scaffold_590_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20473..21192)
DNA (720bp) protein (240aa)
Neutral zinc metallopeptidase family protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6W446_9CLOT
Neutral zinc metallopeptidase family protein {ECO:0000313|EMBL:CDC98961.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted Zn-dependent protease
L2_040_365G1_scaffold_590_19
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21254..22189)
DNA (936bp) protein (312aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=2 Tax=root RepID=R6VWW9_9CLOT
L2_040_365G1_scaffold_590_20
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22213..22695)
DNA (483bp) protein (161aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=2 Tax=root RepID=R6WXX8_9CLOT
L2_040_365G1_scaffold_590_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(22709..24973)
DNA (2265bp) protein (755aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Primosomal protein N' PriA n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELU3_9FIRM
priA; primosomal protein N' PriA
L2_040_365G1_scaffold_590_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24987..26540)
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Clostridium sp. CAG:91 RepID=R6VKA4_9CLOT
L2_040_365G1_scaffold_590_23
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26662..28809
DNA (2148bp) protein (716aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VPG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC98935.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_590_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28799..29476)
DNA (678bp) protein (226aa)
YitT family protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6WXU9_9CLOT
YitT family protein {ECO:0000313|EMBL:CDC98932.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
hypothetical protein
L2_040_365G1_scaffold_590_25
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29521..29616
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CQP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY32150.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
Displaying 25 items

View Taxonomy