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L2_040_365G1_scaffold_616

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_616_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..117
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J222_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43061.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_616_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

120..383
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J2E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY43062.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_616_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1160..1954
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44115.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
D-alanyl-D-alanine carboxypeptidase.
L2_040_365G1_scaffold_616_4
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2249..2725
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J553_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44022.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_616_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3249..4637)
DNA (1389bp) protein (463aa)
Amino acid carrier protein n=1 Tax=Clostridium sp. CAG:7 PF1_9CLOT">RepID=R5IPF1_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:CCY44018.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid carrier protein
L2_040_365G1_scaffold_616_6
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4843..5742)
DNA (900bp) protein (300aa)
Transcriptional regulator LysR family n=1 Tax=Clostridium sp. CAG:7 RepID=R5J549_9CLOT
Transcriptional regulator LysR family {ECO:0000313|EMBL:CCY44017.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
cynR2; HTH-type transcriptional regulator CynR
L2_040_365G1_scaffold_616_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5858..7294
DNA (1437bp) protein (479aa)
Transporter CPA2 family n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4T5_9CLOT
Transporter CPA2 family {ECO:0000313|EMBL:CCY44016.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
transporter
L2_040_365G1_scaffold_616_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7296..8012
DNA (717bp) protein (239aa)
Uncharacterized membrane protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPM3_9CLOT
Uncharacterized membrane protein {ECO:0000313|EMBL:CCY44015.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Uncharacterized membrane protein
L2_040_365G1_scaffold_616_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8239..9117)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44014.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L2_040_365G1_scaffold_616_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9137..9634)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44013.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ECF subfamily RNA polymerase sigma-24 subunit
L2_040_365G1_scaffold_616_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9867..10526
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J545_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44012.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
putative peptidoglycan hydrolase
L2_040_365G1_scaffold_616_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10594..11409)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44011.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
HisJ family histidinol phosphate phosphatase
L2_040_365G1_scaffold_616_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11717..12748
DNA (1032bp) protein (344aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPM0_9CLOT
L2_040_365G1_scaffold_616_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12853..14073
DNA (1221bp) protein (407aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUN3_9CLOT
L2_040_365G1_scaffold_616_15
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14182..14934
DNA (753bp) protein (251aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPE3_9CLOT
L2_040_365G1_scaffold_616_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15180..16724
DNA (1545bp) protein (515aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J542_9CLOT
L2_040_365G1_scaffold_616_17
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(16920..17234)
DNA (315bp) protein (105aa)
Tax=RBG_16_Chloroflexi_48_8_curated
L2_040_365G1_scaffold_616_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

17248..18609
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R403_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35358.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
cell wall binding repeat-containing protein
L2_040_365G1_scaffold_616_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18701..20119)
DNA (1419bp) protein (473aa)
Tyrosine phenol-lyase {ECO:0000256|HAMAP-Rule:MF_00543}; EC=4.1.99.2 {ECO:0000256|HAMAP-Rule:MF_00543};; Beta-tyrosinase {ECO:0000256|HAMAP-Rule:MF_00543}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
tyrosine phenol-lyase (EC:4.1.99.2)
Tyrosine phenol-lyase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4T0_9CLOT
L2_040_365G1_scaffold_616_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20189..21676)
DNA (1488bp) protein (496aa)
Amino acid carrier protein alsT n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPL6_9CLOT
Amino acid carrier protein alsT {ECO:0000313|EMBL:CCY44005.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
amino acid carrier protein
L2_040_365G1_scaffold_616_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22084..22776
DNA (693bp) protein (231aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IUN2_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY44004.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
GntR family transcriptional regulator
L2_040_365G1_scaffold_616_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22790..23659
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPE0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44003.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
EDD domain protein, DegV family
L2_040_365G1_scaffold_616_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23670..25139
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J534_9CLOT
L2_040_365G1_scaffold_616_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25136..26083
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J4S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44001.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
lipoprotein LpqB
L2_040_365G1_scaffold_616_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26113..28566
DNA (2454bp) protein (818aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44000.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DNA internalization-related competence protein ComEC/Rec2
Displaying 25 items

View Taxonomy