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L2_040_365G1_scaffold_639

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_639_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..402)
DNA (402bp) protein (134aa)
Dihydrodipicolinate synthase n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AYP2_9FIRM
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:EQJ50523.1}; Flags: Fragment;; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dihydrodipicolinate synthetase
L2_040_365G1_scaffold_639_2
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(395..1015)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VQ94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74842.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
sugar isomerase
L2_040_365G1_scaffold_639_3
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1024..1956)
DNA (933bp) protein (311aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BC06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25901.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L2_040_365G1_scaffold_639_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2036..2887)
DNA (852bp) protein (284aa)
PTS system mannose/fructose/sorbose family IID component n=7 Tax=Firmicutes RepID=E2SPK1_9FIRM
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ50517.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Man family PTS system transporter subunit IID
L2_040_365G1_scaffold_639_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2884..3630)
DNA (747bp) protein (249aa)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4M0B5_9CLOT
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQJ50516.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS sorbose-specific transporter subunit IIC
L2_040_365G1_scaffold_639_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3646..4128)
DNA (483bp) protein (161aa)
PTS system sorbose subfamily IIB component n=5 Tax=Firmicutes RepID=E4M0B4_9CLOT
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EFR35522.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system sorbose subfamily transporter subunit IIB
L2_040_365G1_scaffold_639_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4473..5114
DNA (642bp) protein (214aa)
4-hydroxy-2-oxoglutarate aldolase (EC:4.1.3.16)
KDPG and KHG aldolase n=5 Tax=Firmicutes RepID=E4M0B3_9CLOT
KDPG and KHG aldolase {ECO:0000313|EMBL:EFR35519.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_040_365G1_scaffold_639_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5698..7149)
DNA (1452bp) protein (484aa)
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFR35528.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EFR35528.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Glycosyl hydrolase, family 1 n=5 Tax=Firmicutes RepID=E4M0B1_9CLOT
glycoside hydrolase family protein
L2_040_365G1_scaffold_639_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7194..7910)
DNA (717bp) protein (239aa)
UbiC transcription regulator-associated domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4M0B0_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EFR35529.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GntR family transcriptional regulator
L2_040_365G1_scaffold_639_10
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8303..8752
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium sp. HGF2 RepID=E4M0A9_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR35533.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_639_11
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9194..9718
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AYM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86928.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_040_365G1_scaffold_639_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9778..10368)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AYM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86929.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Predicted small molecule binding protein (contains 3H domain)
L2_040_365G1_scaffold_639_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10381..11238)
DNA (858bp) protein (286aa)
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:EQJ50506.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EQJ50506.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=5 Tax=Firmicutes RepID=E4M0A6_9CLOT
nicotinate-nucleotide pyrophosphorylase
L2_040_365G1_scaffold_639_14
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11207..12424)
DNA (1218bp) protein (406aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=2 Tax=Firmicutes RepID=E4M0A5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO25890.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_040_365G1_scaffold_639_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12446..13351)
DNA (906bp) protein (302aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Quinolinate synthetase complex, A subunit n=4 Tax=Firmicutes RepID=E4M0A4_9CLOT
quinolinate synthetase A
L2_040_365G1_scaffold_639_16
unknown

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comp(13555..13695)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_040_365G1_scaffold_639_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13778..14662)
DNA (885bp) protein (295aa)
Stage 0 sporulation protein J n=2 Tax=Firmicutes RepID=E4M0A3_9CLOT
Stage 0 sporulation protein J {ECO:0000313|EMBL:EFR35521.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ParB-like partition protein
L2_040_365G1_scaffold_639_18
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14675..15457)
DNA (783bp) protein (261aa)
Sporulation initiation inhibitor protein Soj n=7 Tax=Firmicutes RepID=E4M0A2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX74826.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
chromosome partitioning ATPase
L2_040_365G1_scaffold_639_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15473..16237)
DNA (765bp) protein (255aa)
ParB-like protein n=6 Tax=Firmicutes RepID=E4M0A1_9CLOT
ParB-like partition protein {ECO:0000313|EMBL:EHO25886.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
ParB-like partition protein
L2_040_365G1_scaffold_639_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16249..16959)
DNA (711bp) protein (237aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ribosomal RNA small subunit methyltransferase G n=5 Tax=Firmicutes RepID=E4M0A0_9CLOT
rRNA small subunit methyltransferase, glucose inhibited division protein GidB
L2_040_365G1_scaffold_639_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18251..18868)
DNA (618bp) protein (206aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQ75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88685.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_639_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19088..19768)
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VQ74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88684.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Response regulator of the LytR/AlgR family
L2_040_365G1_scaffold_639_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19795..20514)
DNA (720bp) protein (240aa)
YdjC-like protein n=5 Tax=Firmicutes RepID=E4LVF7_9CLOT
PTS cellbiose transporter subunit IIC {ECO:0000313|EMBL:KGJ51687.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L2_040_365G1_scaffold_639_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20577..21281)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BBX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26032.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
beta-lactamase domain-containing protein
L2_040_365G1_scaffold_639_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21539..22801)
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=7 Tax=Firmicutes RepID=E4LVF5_9CLOT
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
L2_040_365G1_scaffold_639_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23060..24544
DNA (1485bp) protein (495aa)
UPF0371 protein HMPREF9406_3022 n=4 Tax=Firmicutes RepID=E4LVF4_9CLOT
UPF0371 protein HMPREF9406_3022 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_639_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24592..26265
DNA (1674bp) protein (558aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LVF3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37231.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
arylsulfate sulfotransferase
L2_040_365G1_scaffold_639_28
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26567..26926
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VMY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC83807.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ArsC family protein
L2_040_365G1_scaffold_639_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26970..27332
DNA (363bp) protein (121aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AYK9_9FIRM
Iron dependent repressor, N-terminal DNA binding domain protein {ECO:0000313|EMBL:EQJ59607.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DtxR family iron (metal) dependent repressor
Displaying 29 items

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