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L2_040_365G1_scaffold_649

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_649_1
unknown

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comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

L2_040_365G1_scaffold_649_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(241..2799)
DNA (2559bp) protein (853aa)
ATP-dependent chaperone ClpB n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6VHW1_9FIRM
ATP-dependent chaperone ClpB {ECO:0000313|EMBL:CDC82047.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
clpB; ATP-dependent chaperone ClpB
L2_040_365G1_scaffold_649_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3283..3924)
DNA (642bp) protein (214aa)
HAD hydrolase, family IA, variant 3 n=5 Tax=Firmicutes RepID=E4LQN5_9CLOT
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:EQJ48661.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Hydrolase, haloacid dehalogenase-like family
L2_040_365G1_scaffold_649_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3902..4486)
DNA (585bp) protein (195aa)
rRNA methylase family protein n=7 Tax=Firmicutes RepID=T4MZR0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:ENY84390.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Putative rRNA methylase
L2_040_365G1_scaffold_649_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4543..5907
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6UPC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC82041.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
tRNA-nucleotidyltransferase/Poly(A) polymerase family protein
L2_040_365G1_scaffold_649_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6048..6320)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B3S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ48658.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_649_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6422..6994)
DNA (573bp) protein (191aa)
Chromate transport protein n=7 Tax=Firmicutes RepID=E4LQN9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84387.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Chromate transport protein ChrA
L2_040_365G1_scaffold_649_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6991..7566)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=unclassified Erysipelotrichaceae RepID=G1VVW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84386.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Chromate transport protein ChrA
L2_040_365G1_scaffold_649_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7660..8556
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=3 Tax=Firmicutes RepID=E4LQP1_9CLOT
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EQJ48655.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
LysR family transcriptional regulator
L2_040_365G1_scaffold_649_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8700..8933)
DNA (234bp) protein (78aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LQP2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84384.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_649_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9652..10803)
DNA (1152bp) protein (384aa)
hutI; putative imidazolonepropionase (EC:3.5.2.7)
Amidohydrolase family protein n=4 Tax=Firmicutes RepID=E4LTE0_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:EFR37963.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L2_040_365G1_scaffold_649_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10828..11907)
DNA (1080bp) protein (360aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVW0_9FIRM
L2_040_365G1_scaffold_649_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11908..12402)
DNA (495bp) protein (165aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
3-isopropylmalate dehydratase small subunit n=5 Tax=Firmicutes RepID=E4LTD8_9CLOT
leuD; 3-isopropylmalate dehydratase
L2_040_365G1_scaffold_649_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12405..13670)
DNA (1266bp) protein (422aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=3 Tax=Firmicutes RepID=E4LTD7_9CLOT
L2_040_365G1_scaffold_649_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13690..15390)
DNA (1701bp) protein (567aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=2 Tax=Erysipelotrichaceae RepID=H1B3S9_9FIRM
L2_040_365G1_scaffold_649_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15860..16579)
DNA (720bp) protein (240aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=3 Tax=Firmicutes RepID=E4LTD5_9CLOT
L2_040_365G1_scaffold_649_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16724..17569)
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84377.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein DUF1703
L2_040_365G1_scaffold_649_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17563..17811)
DNA (249bp) protein (83aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LTD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37954.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L2_040_365G1_scaffold_649_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17877..18248)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84376.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L2_040_365G1_scaffold_649_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18294..18476)
DNA (183bp) protein (61aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGJ51698.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L2_040_365G1_scaffold_649_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18622..19542
DNA (921bp) protein (307aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B3T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81985.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Mannose-6-phosphate isomerase, class I/beta-galactosidase
L2_040_365G1_scaffold_649_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19617..20003)
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1B3T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81983.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_040_365G1_scaffold_649_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20304..20537)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84373.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein DUF1703
L2_040_365G1_scaffold_649_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20688..20927)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY84372.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_649_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20932..21234)
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B3T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81978.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L2_040_365G1_scaffold_649_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21296..22525)
DNA (1230bp) protein (410aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Firmicutes RepID=E4LTC9_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFR37960.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_649_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22509..23192)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B3T8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:KGJ51703.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
transcriptional regulator
L2_040_365G1_scaffold_649_28
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23207..23968)
DNA (762bp) protein (254aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1B3T9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ51704.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
ABC transporter ATP-binding protein
L2_040_365G1_scaffold_649_29
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24028..26361)
DNA (2334bp) protein (778aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVU5_9FIRM
ABC transporter permease {ECO:0000313|EMBL:KGJ51705.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
Displaying 29 items

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