ggKbase home page

L2_040_365G1_scaffold_711

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_711_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(175..1035)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD (Sigma-A) n=42 Tax=root RepID=Q8A863_BACTN
RNA polymerase sigma factor rpoD (sigma-A)
Sigma-70 region 2 {ECO:0000313|EMBL:EDM20421.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L2_040_365G1_scaffold_711_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1228..2757)
DNA (1530bp) protein (510aa)
protease Do (EC:3.4.21.108)
Peptidase Do n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HX96_BACUN
Peptidase Do {ECO:0000313|EMBL:EOS05780.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
L2_040_365G1_scaffold_711_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3105..4439)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HPG5_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05779.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
transglutaminase
L2_040_365G1_scaffold_711_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4436..5608)
DNA (1173bp) protein (391aa)
Tat pathway signal sequence domain protein n=4 Tax=Bacteroides uniformis RepID=A7V9Q0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82359.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
mandelate racemase
L2_040_365G1_scaffold_711_5
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5740..7011)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R7ET91_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE04712.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
NLP/P60 protein
L2_040_365G1_scaffold_711_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7590..8909
DNA (1320bp) protein (440aa)
tRNA-processing RNAse BN (EC:3.1.-.-)
YihY family protein n=4 Tax=Bacteroides RepID=D2F0R2_9BACE
YihY family protein {ECO:0000313|EMBL:EFA19730.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
L2_040_365G1_scaffold_711_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9037..9126)
DNA (90bp) protein (30aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9UHG9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82356.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
L2_040_365G1_scaffold_711_8
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9139..9741)
DNA (603bp) protein (201aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=5 Tax=Bacteroides RepID=D2F0R1_9BACE
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDE04715.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L2_040_365G1_scaffold_711_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10094..10789)
DNA (696bp) protein (232aa)
Phosphate-specific transport system accessory protein PhoU n=5 Tax=Bacteroides RepID=D2F0R0_9BACE
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
phosphate uptake regulator, PhoU
L2_040_365G1_scaffold_711_10
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10850..11605)
DNA (756bp) protein (252aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
phosphate ABC transporter ATP-binding protein, PhoT family (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP33_BACUN
L2_040_365G1_scaffold_711_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11623..12483)
DNA (861bp) protein (287aa)
Phosphate ABC transporter, permease PstA n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HPR2_BACUN
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:EOS05771.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
phosphate ABC transporter permease
L2_040_365G1_scaffold_711_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12496..13680)
DNA (1185bp) protein (395aa)
Phosphate ABC transporter, permease PstC n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HX88_BACUN
Phosphate ABC transporter, permease PstC {ECO:0000313|EMBL:EOS05770.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
phosphate ABC transporter permease
L2_040_365G1_scaffold_711_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13872..14693
DNA (822bp) protein (274aa)
Phosphate binding protein n=1 Tax=Bacteroides uniformis dnLKV2 PF8_BACUN">RepID=R9HPF8_BACUN
Phosphate binding protein {ECO:0000313|EMBL:EOS05769.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
phosphate ABC transporter substrate-binding protein, PhoT family
L2_040_365G1_scaffold_711_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14768..16507
DNA (1740bp) protein (580aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine-tRNA ligase n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HNZ0_BACUN
L2_040_365G1_scaffold_711_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16512..17924
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP29_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05767.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
L2_040_365G1_scaffold_711_16
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17953..18591
DNA (639bp) protein (213aa)
SNARE-like domain protein n=7 Tax=Bacteroides RepID=A7V9R4_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE04724.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
hypothetical protein
L2_040_365G1_scaffold_711_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18682..19182)
DNA (501bp) protein (167aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
thiol peroxidase (EC:1.11.1.5)
Probable thiol peroxidase n=7 Tax=Bacteroides RepID=A7V9R5_BACUN
L2_040_365G1_scaffold_711_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19309..19908
DNA (600bp) protein (200aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V9R6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82345.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L2_040_365G1_scaffold_711_19
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19972..20565)
DNA (594bp) protein (198aa)
Resolvase, N-terminal domain protein n=5 Tax=Bacteroides RepID=A7V9R7_BACUN
Resolvase {ECO:0000313|EMBL:EFV25294.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
Resolvase domain protein
L2_040_365G1_scaffold_711_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20795..22036)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HP25_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05762.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L2_040_365G1_scaffold_711_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22180..22818)
DNA (639bp) protein (213aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=2 Tax=Bacteroides uniformis RepID=A7V9R9_BACUN
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:EDO51796.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
sugar o-acyltransferase, sialic acid o-acetyltransferase neud family
L2_040_365G1_scaffold_711_22
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22830..23438)
DNA (609bp) protein (203aa)
Bacterial sugar transferase n=2 Tax=Bacteroides uniformis RepID=A7V9S0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS05760.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
putative UDP-galactose phosphate transferase
L2_040_365G1_scaffold_711_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23443..24645)
DNA (1203bp) protein (401aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDO51798.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDO51798.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Glycosyltransferase, group 1 family protein n=2 Tax=Bacteroides uniformis RepID=A7V9S1_BACUN
putative glycosyltransferase
L2_040_365G1_scaffold_711_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24654..24866)
DNA (213bp) protein (71aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EDO51799.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EDO51799.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V9S2_BACUN
Displaying 24 items

View Taxonomy