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L2_040_365G1_scaffold_736

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_736_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..519
DNA (519bp) protein (173aa)
Resolvase, N-terminal domain protein n=6 Tax=Firmicutes RepID=E4LUZ8_9CLOT
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EQJ56908.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_040_365G1_scaffold_736_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(593..2497)
DNA (1905bp) protein (635aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56907.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_040_365G1_scaffold_736_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2663..3214)
DNA (552bp) protein (184aa)
LemA family protein n=6 Tax=Firmicutes RepID=E4LV00_9CLOT
LemA family protein {ECO:0000313|EMBL:EQJ56906.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L2_040_365G1_scaffold_736_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3358..4590)
DNA (1233bp) protein (411aa)
Aminopeptidase 2 (EC:3.4.11.-)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATH6_9FIRM
Thermophilic metalloprotease family protein {ECO:0000313|EMBL:EQJ56905.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4595..5500)
DNA (906bp) protein (302aa)
ROK family protein n=7 Tax=Firmicutes RepID=E4LV02_9CLOT
ROK family protein {ECO:0000313|EMBL:EQJ56904.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glk.2; glucokinase
L2_040_365G1_scaffold_736_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5577..5897)
DNA (321bp) protein (107aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56903.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5907..6305)
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56902.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
bacterial Ig-like domain family protein
L2_040_365G1_scaffold_736_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6305..6433)
DNA (129bp) protein (43aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV05_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85310.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_736_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6435..6548)
DNA (114bp) protein (38aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85309.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L2_040_365G1_scaffold_736_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6548..7240)
DNA (693bp) protein (231aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ56899.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7241..8023)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NHS4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56898.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8010..9035)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV09_9CLOT
Type II/IV secretion system family protein {ECO:0000313|EMBL:EQJ56897.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Flp pilus assembly protein, ATPase CpaF
L2_040_365G1_scaffold_736_13
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9037..9192)
DNA (156bp) protein (52aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO20444.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_040_365G1_scaffold_736_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9281..9658)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LV11_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56895.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9661..11244)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATI7_9FIRM
Repeat, TIGR02543 family domain protein {ECO:0000313|EMBL:EQJ56894.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cell wall/surface repeat protein
L2_040_365G1_scaffold_736_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11296..12360)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ATI8_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EQJ56893.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_736_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12604..14025)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Pyruvate kinase n=7 Tax=Firmicutes RepID=E4LV14_9CLOT
pyk; pyruvate kinase
L2_040_365G1_scaffold_736_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14075..15037)
DNA (963bp) protein (321aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
6-phosphofructokinase n=7 Tax=Firmicutes RepID=E4LV15_9CLOT
6-phosphofructokinase
L2_040_365G1_scaffold_736_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15095..16009)
DNA (915bp) protein (305aa)
Primosomal protein DnaI n=7 Tax=Firmicutes RepID=E4LV16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85299.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
DNA replication protein
L2_040_365G1_scaffold_736_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16010..17206)
DNA (1197bp) protein (399aa)
Replication initiation and membrane attachment family protein n=1 Tax=Clostridium difficile P28 RepID=T4NT41_CLODI
Replication initiation and membrane attachment family protein {ECO:0000313|EMBL:EQJ58456.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DnaD and phage-associated domain
L2_040_365G1_scaffold_736_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17211..17804)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=4 Tax=Firmicutes RepID=H1ATJ4_9FIRM
L2_040_365G1_scaffold_736_22
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17801..18631)
DNA (831bp) protein (277aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
formamidopyrimidine-DNA glycosylase (fpg) (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase n=6 Tax=Firmicutes RepID=G1VMD0_9FIRM
L2_040_365G1_scaffold_736_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18640..21225)
DNA (2586bp) protein (862aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DNA polymerase n=1 Tax=Clostridium difficile P28 RepID=T4NSQ1_CLODI
polA; DNA polymerase I
L2_040_365G1_scaffold_736_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21331..22287)
DNA (957bp) protein (319aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATJ7_9FIRM
Periplasmic solute binding family protein {ECO:0000313|EMBL:EQJ58460.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC transporter metal-binding lipoprotein
L2_040_365G1_scaffold_736_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22400..23176)
DNA (777bp) protein (259aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATJ8_9FIRM
Peptidase M50 family protein {ECO:0000313|EMBL:EQJ58461.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
peptidase M50 family protein
L2_040_365G1_scaffold_736_26
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23163..23738)
DNA (576bp) protein (192aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LV23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85292.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Displaying 26 items

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