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L2_040_365G1_scaffold_780

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_040_365G1_scaffold_780_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(94..378)
DNA (285bp) protein (95aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=R2BAR8_ENTFC
Transposase and inactivated derivatives
Transposase, mutator type {ECO:0000313|EMBL:EFF26343.1}; Flags: Fragment;; TaxID=546340 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium E1679.;"
L2_040_365G1_scaffold_780_2
Firmicutes bacterium CAG:308, Firmicutes, Bacteria

Not on your lists

comp(556..1446)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QMY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD51995.1}; TaxID=1263016 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:308.;"
hypothetical protein
L2_040_365G1_scaffold_780_3
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1711..2154
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B5352E
Uncharacterized protein {ECO:0000313|EMBL:ERK46950.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
L2_040_365G1_scaffold_780_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2141..2728
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B53B07
Uncharacterized protein {ECO:0000313|EMBL:EOS72879.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
L2_040_365G1_scaffold_780_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2967..4262)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37635.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_780_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4626..6521)
DNA (1896bp) protein (632aa)
ABC transporter, solute-binding protein n=5 Tax=Firmicutes RepID=E4LUB0_9CLOT
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EQJ64092.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type spermidine/putrescine transport system, permease component II
L2_040_365G1_scaffold_780_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6518..7366)
DNA (849bp) protein (283aa)
ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LUA9_9CLOT
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQJ64091.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ABC-type spermidine/putrescine transport system, permease component I
L2_040_365G1_scaffold_780_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7368..8945)
DNA (1578bp) protein (526aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00035095}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00035095};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Polyamine ABC transporter, ATP-binding protein n=7 Tax=Firmicutes RepID=E4LUA8_9CLOT
potA; spermidine/putrescine ABC transporter ATP-binding protein
L2_040_365G1_scaffold_780_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8959..9492)
DNA (534bp) protein (178aa)
Cupin domain protein n=7 Tax=Firmicutes RepID=E4LUA7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84216.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
XRE family transcriptional regulator
L2_040_365G1_scaffold_780_10
unknown

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10006..10206
DNA (201bp) protein (67aa)

This feature has no annotations

L2_040_365G1_scaffold_780_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10262..10552)
DNA (291bp) protein (97aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64087.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L2_040_365G1_scaffold_780_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10624..11034)
DNA (411bp) protein (137aa)
Transcriptional regulator, HxlR family n=4 Tax=Firmicutes RepID=E4LUA4_9CLOT
HxlR-like helix-turn-helix family protein {ECO:0000313|EMBL:EQJ64086.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator, HxlR family
L2_040_365G1_scaffold_780_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11332..12423)
DNA (1092bp) protein (364aa)
Transcriptional regulator, ArsR family n=5 Tax=Firmicutes RepID=E4LUA3_9CLOT
Bacterial regulatory , arsR family protein {ECO:0000313|EMBL:EQJ64085.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ArsR family transcriptional regulator
L2_040_365G1_scaffold_780_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12443..13675)
DNA (1233bp) protein (411aa)
Transporter, major facilitator family protein n=7 Tax=Firmicutes RepID=E4LUA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84212.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
major facilitator superfamily protein
L2_040_365G1_scaffold_780_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13898..14653)
DNA (756bp) protein (252aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B449_9FIRM
Putative esterase {ECO:0000313|EMBL:EFR37626.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_780_16
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14689..15282)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BAE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27589.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L2_040_365G1_scaffold_780_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15330..15917)
DNA (588bp) protein (196aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LU99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64081.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Phosphoribosylamine-glycine ligase
L2_040_365G1_scaffold_780_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15933..17246)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B452_9FIRM
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:EQJ64080.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
polysaccharide deacetylase
L2_040_365G1_scaffold_780_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17374..19209
DNA (1836bp) protein (612aa)
GTP-binding protein TypA n=5 Tax=Firmicutes RepID=E4LU97_9CLOT
GTP-binding protein TypA {ECO:0000313|EMBL:EFR37627.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GTP-binding protein TypA/BipA
L2_040_365G1_scaffold_780_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19668..20060)
DNA (393bp) protein (131aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LVG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY84207.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Zn-finger containing protein
L2_040_365G1_scaffold_780_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20621..21235
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LVG4_9CLOT
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
membrane protein
L2_040_365G1_scaffold_780_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21344..21823)
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=E4LVG3_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFR37221.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GCN5-like N-acetyltransferase
L2_040_365G1_scaffold_780_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21895..22620)
DNA (726bp) protein (242aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=E4LVG2_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFR37225.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L2_040_365G1_scaffold_780_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22617..23225)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LVG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR37227.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_780_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23243..24748)
DNA (1506bp) protein (502aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LVG0_9CLOT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR37222.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L2_040_365G1_scaffold_780_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24819..25664)
DNA (846bp) protein (282aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64070.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
Displaying 26 items

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